Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 HMGB3P2-201ENST00000411913 584 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.12□□□□□ -2.07
CDCA3Q99618 MTCO3P46-201ENST00000425787 232 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 Z82205.1-201ENST00000428456 297 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.12□□□□□ -2.07
CDCA3Q99618 IPO7P1-201ENST00000442031 636 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.12□□□□□ -2.07
CDCA3Q99618 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.12□□□□□ -2.07
CDCA3Q99618 PTP4A1P4-201ENST00000512479 322 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.12□□□□□ -2.07
CDCA3Q99618 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.12□□□□□ -2.07
CDCA3Q99618 MIR3136-201ENST00000583498 78 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 AL034555.1-201ENST00000604816 211 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 MIR8076-201ENST00000611401 83 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 SNORA43.4-201ENST00000629559 138 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 AP000560.1-201ENST00000624150 1937 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 AC092268.1-201ENST00000342691 405 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.11□□□□□ -2.07
CDCA3Q99618 RNU4-15P-201ENST00000362613 141 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 RNU1-23P-201ENST00000363361 144 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 RNU6-142P-201ENST00000384019 107 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 MIR517A-201ENST00000385001 87 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 MIR561-201ENST00000385216 97 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CDCA3Q99618 SNORA40.18-201ENST00000391200 128 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 AL139156.1-201ENST00000412785 841 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 AC108667.1-201ENST00000428618 249 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 AL353572.1-201ENST00000442490 417 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.11□□□□□ -2.07
CDCA3Q99618 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.11□□□□□ -2.07
CDCA3Q99618 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 RNU7-30P-201ENST00000516835 62 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 AP005639.2-201ENST00000527592 928 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.11□□□□□ -2.07
CDCA3Q99618 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.11□□□□□ -2.07
CDCA3Q99618 MIR4790-201ENST00000577799 79 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.11□□□□□ -2.07
CDCA3Q99618 AC078795.3-201ENST00000602913 472 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 AL078605.1-201ENST00000603529 500 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 AC018889.1-201ENST00000605372 397 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 snoU13.31-201ENST00000607291 104 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 DUXAP9-208ENST00000622815 614 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 AL450472.1-202ENST00000637286 180 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 AC099654.14-201ENST00000638599 341 ntBASIC2.11□□□□□ -2.07
CDCA3Q99618 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDCA3Q99618 RNU6-845P-201ENST00000362578 103 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 RNU6-944P-201ENST00000364023 107 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 RNU4-56P-201ENST00000364700 142 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 Y_RNA.279-201ENST00000364763 95 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 RNU6-306P-201ENST00000384617 107 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 MIR29B2-201ENST00000385055 81 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CDCA3Q99618 Y_RNA.597-201ENST00000410463 100 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.1□□□□□ -2.07
CDCA3Q99618 AC138393.2-201ENST00000414742 246 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.1□□□□□ -2.07
CDCA3Q99618 RPL21P111-201ENST00000418453 477 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 AL445685.2-201ENST00000422551 342 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 AL590556.1-201ENST00000423231 483 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDCA3Q99618 PMCHL2-203ENST00000457791 237 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 AC116353.2-201ENST00000505332 712 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 AL117351.2-201ENST00000513571 157 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.1□□□□□ -2.07
CDCA3Q99618 AC046134.1-201ENST00000514454 666 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.1□□□□□ -2.07
CDCA3Q99618 MRPS36P4-201ENST00000534436 298 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.1□□□□□ -2.07
CDCA3Q99618 GNAI2P1-201ENST00000541815 315 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 AC009127.3-201ENST00000570531 403 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 RPS3AP23-202ENST00000574601 686 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 MIR4801-201ENST00000582704 82 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 POLR3GP2-201ENST00000588366 668 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 AL161423.1-201ENST00000613700 262 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 AC245884.12-201ENST00000615364 59 ntBASIC2.1□□□□□ -2.07
CDCA3Q99618 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDCA3Q99618 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CDCA3Q99618 AC005336.3-201ENST00000623833 2679 ntBASIC2.09□□□□□ -2.07
CDCA3Q99618 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CDCA3Q99618 AL596028.1-201ENST00000326971 197 ntBASIC2.09□□□□□ -2.07
CDCA3Q99618 Y_RNA.226-201ENST00000364337 114 ntBASIC2.09□□□□□ -2.07
CDCA3Q99618 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.09□□□□□ -2.07
CDCA3Q99618 SNORA51.11-201ENST00000384442 131 ntBASIC2.09□□□□□ -2.07
CDCA3Q99618 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
CDCA3Q99618 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.09□□□□□ -2.07
CDCA3Q99618 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.09□□□□□ -2.07
CDCA3Q99618 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.09□□□□□ -2.07
CDCA3Q99618 AC145146.1-201ENST00000496370 254 ntBASIC2.09□□□□□ -2.07
CDCA3Q99618 SNORA48.11-201ENST00000517015 89 ntBASIC2.09□□□□□ -2.07
CDCA3Q99618 AC021231.3-201ENST00000558497 370 ntBASIC2.09□□□□□ -2.07
CDCA3Q99618 MIR3923-201ENST00000579521 83 ntBASIC2.09□□□□□ -2.07
CDCA3Q99618 AC124303.1-201ENST00000605703 360 ntBASIC2.09□□□□□ -2.07
CDCA3Q99618 AL022345.1-201ENST00000607292 135 ntBASIC2.09□□□□□ -2.07
CDCA3Q99618 MIR6128-201ENST00000615528 109 ntBASIC2.09□□□□□ -2.07
CDCA3Q99618 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CDCA3Q99618 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CDCA3Q99618 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CDCA3Q99618 SNORA12-201ENST00000391162 147 ntBASIC2.08□□□□□ -2.08
CDCA3Q99618 RN7SKP158-201ENST00000410453 326 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 242.6 ms