Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
VAT1Q99536 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
VAT1Q99536 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.94□□□□□ -2.26
VAT1Q99536 RNU6-545P-201ENST00000362681 104 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 SNORA4.2-201ENST00000365313 147 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 MIR1-2-201ENST00000384961 85 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 MIR532-201ENST00000385025 91 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 SNORA16.2-201ENST00000390991 127 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 SNORD70.1-201ENST00000391007 85 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 MIR208B-201ENST00000401172 77 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 RNU4-46P-201ENST00000410818 138 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.94□□□□□ -2.26
VAT1Q99536 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.94□□□□□ -2.26
VAT1Q99536 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.94□□□□□ -2.26
VAT1Q99536 AC009961.2-201ENST00000435771 251 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 AC069257.2-201ENST00000441819 155 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 AC132479.1-201ENST00000449160 144 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 AC091435.1-201ENST00000505442 584 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 AC067942.3-201ENST00000512025 362 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 AC011406.1-201ENST00000512440 370 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 RNA5SP404-201ENST00000517118 132 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 CENPUP1-201ENST00000526649 1202 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 AC002044.1-201ENST00000606707 158 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 MIR6857-201ENST00000613267 93 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 MIR8065-201ENST00000620577 100 ntBASIC0.94□□□□□ -2.26
VAT1Q99536 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.94□□□□□ -2.26
VAT1Q99536 RNU6-434P-201ENST00000384376 107 ntBASIC0.93□□□□□ -2.26
VAT1Q99536 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.93□□□□□ -2.26
VAT1Q99536 Z99497.1-201ENST00000421282 135 ntBASIC0.93□□□□□ -2.26
VAT1Q99536 USP9YP14-201ENST00000430663 563 ntBASIC0.93□□□□□ -2.26
VAT1Q99536 USP9YP28-201ENST00000435142 589 ntBASIC0.93□□□□□ -2.26
VAT1Q99536 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.93□□□□□ -2.26
VAT1Q99536 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.93□□□□□ -2.26
VAT1Q99536 DYNLT3P2-201ENST00000442517 295 ntBASIC0.93□□□□□ -2.26
VAT1Q99536 RPS29P15-201ENST00000458329 171 ntBASIC0.93□□□□□ -2.26
VAT1Q99536 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.93□□□□□ -2.26
VAT1Q99536 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.93□□□□□ -2.26
VAT1Q99536 AC108729.3-201ENST00000513484 108 ntBASIC0.93□□□□□ -2.26
VAT1Q99536 RNU7-40P-201ENST00000516397 64 ntBASIC0.93□□□□□ -2.26
VAT1Q99536 SCARNA1-201ENST00000517138 166 ntBASIC0.93□□□□□ -2.26
VAT1Q99536 AL442163.3-201ENST00000554110 156 ntBASIC0.93□□□□□ -2.26
VAT1Q99536 TMF1P1-201ENST00000576058 373 ntBASIC0.93□□□□□ -2.26
VAT1Q99536 MIR3682-201ENST00000581338 84 ntBASIC0.93□□□□□ -2.26
VAT1Q99536 AC064807.4-201ENST00000607201 407 ntBASIC0.93□□□□□ -2.26
VAT1Q99536 AL353149.1-201ENST00000610667 244 ntBASIC0.93□□□□□ -2.26
VAT1Q99536 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
VAT1Q99536 RNU6-1097P-201ENST00000363586 107 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 RNU6-108P-201ENST00000365558 107 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 RNU6-1127P-201ENST00000384580 107 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 RNU6-321P-201ENST00000410912 106 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 COX6CP10-201ENST00000416832 224 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 MTND3P17-201ENST00000416968 344 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 AC012306.1-201ENST00000423267 114 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.92□□□□□ -2.26
VAT1Q99536 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.92□□□□□ -2.26
VAT1Q99536 C1DP4-201ENST00000455429 424 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.92□□□□□ -2.26
VAT1Q99536 AL163195.1-201ENST00000496941 348 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 AC005178.1-201ENST00000508392 440 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
VAT1Q99536 TRMT112P2-201ENST00000512910 132 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 MTND2P32-201ENST00000521584 1038 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.92□□□□□ -2.26
VAT1Q99536 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.92□□□□□ -2.26
VAT1Q99536 AGGF1P4-201ENST00000568249 801 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 MIR4703-201ENST00000577728 79 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.92□□□□□ -2.26
VAT1Q99536 NIFKP6-201ENST00000598115 845 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 AC064872.1-201ENST00000604823 1072 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 AL603839.4-201ENST00000624658 1005 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 MIR338-201ENST00000636369 67 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 AC099654.5-201ENST00000636479 350 ntBASIC0.92□□□□□ -2.26
VAT1Q99536 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
VAT1Q99536 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
VAT1Q99536 BX322639.1-202ENST00000423987 2213 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 SNORA18.2-201ENST00000383865 132 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 RNU6-1080P-201ENST00000383982 107 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
VAT1Q99536 RPL23AP36-201ENST00000413895 458 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.91□□□□□ -2.26
VAT1Q99536 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.91□□□□□ -2.26
VAT1Q99536 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 PGBD4P5-201ENST00000445958 426 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 RPS23P4-201ENST00000487908 423 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 AC005840.1-201ENST00000498412 377 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.91□□□□□ -2.26
VAT1Q99536 DEFB131C-201ENST00000528817 165 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.91□□□□□ -2.26
VAT1Q99536 MIR3664-201ENST00000579074 99 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 RSL24D1P11-201ENST00000591045 491 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 Z84480.1-201ENST00000605131 311 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 MIR98-201ENST00000606724 119 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 AL136221.1-201ENST00000621449 509 ntBASIC0.91□□□□□ -2.26
VAT1Q99536 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.91□□□□□ -2.26
VAT1Q99536 RNY1P10-201ENST00000363268 113 ntBASIC0.9□□□□□ -2.27
VAT1Q99536 RNU6-266P-201ENST00000364225 107 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms