Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 RN7SL504P-201ENST00000494496 287 ntBASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 MIR622-201ENST00000638396 96 ntBASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
CDK5RAP1Q96SZ6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDK5RAP1Q96SZ6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU4-56P-201ENST00000364700 142 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU6-44P-201ENST00000384045 107 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 SNORA7.4-201ENST00000384249 137 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU6-72P-201ENST00000384285 79 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 MIR10B-201ENST00000385011 110 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 Y_RNA.586-201ENST00000391146 98 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU1-139P-201ENST00000391307 165 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 Y_RNA.597-201ENST00000410463 100 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 AL162725.1-201ENST00000435405 301 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 AL078601.1-201ENST00000444542 271 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 AC096638.1-201ENST00000444678 216 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 AC125238.1-201ENST00000448842 249 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 AC117440.1-201ENST00000474107 571 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 AC006483.1-201ENST00000487308 313 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 RPL23AP49-201ENST00000492925 468 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 SNORA74D-201ENST00000516404 141 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 SNORD116-25-201ENST00000516517 92 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU6-711P-201ENST00000517255 106 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 AK6P2-201ENST00000549020 471 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 SNORD84-203ENST00000584275 78 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 AL645944.1-201ENST00000603857 493 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 uc_338.25-201ENST00000613756 156 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 AC090132.2-201ENST00000615881 347 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 AC005296.1-201ENST00000616145 209 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 AC073349.3-201ENST00000617616 186 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 AC018692.3-201ENST00000623929 123 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 AL391516.1-201ENST00000554380 2449 ntBASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDK5RAP1Q96SZ6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU1-75P-201ENST00000347264 129 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU6-653P-201ENST00000363074 106 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 Y_RNA.331-201ENST00000365267 102 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 MIR34A-201ENST00000385130 110 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU1-101P-201ENST00000391171 127 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU5A-5P-201ENST00000411054 116 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 RPS15AP5-201ENST00000436276 388 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 POLR2KP2-201ENST00000438155 177 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 AC007395.1-201ENST00000451333 677 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 HMGN1P18-201ENST00000457642 277 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 RPL27AP5-201ENST00000469428 449 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 AL160314.1-201ENST00000490836 438 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU6-1114P-201ENST00000516022 107 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU6-62P-201ENST00000516526 102 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 AL391261.3-201ENST00000557194 520 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 AC006001.4-201ENST00000622243 395 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 snoU18.1-201ENST00000629629 71 ntBASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDK5RAP1Q96SZ6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU6-527P-201ENST00000363425 104 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 Y_RNA.217-201ENST00000364214 105 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU6-1286P-201ENST00000383871 107 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 SNORA29-201ENST00000384183 140 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 SNORA36A-201ENST00000384221 132 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 MIR549A-201ENST00000385268 96 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 AL357139.1-201ENST00000407792 426 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU6-257P-201ENST00000410238 98 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 AC138623.1-201ENST00000418060 216 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 YPEL5P1-201ENST00000419731 367 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 RPL27AP8-201ENST00000424277 446 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 AC243964.1-201ENST00000441814 261 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 Y_RNA.641-201ENST00000459414 105 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 SNRPGP7-201ENST00000469016 106 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 MLLT10P2-201ENST00000506434 249 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 SCARNA15.2-201ENST00000516409 127 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 MED28P6-201ENST00000558776 231 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms