Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC018659.1-201ENST00000551083 169 ntBASIC0.42□□□□□ -2.34
CCDC42Q96M95 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.42□□□□□ -2.34
CCDC42Q96M95 MTND3P19-201ENST00000603825 345 ntBASIC0.42□□□□□ -2.34
CCDC42Q96M95 AC242498.1-201ENST00000604134 111 ntBASIC0.42□□□□□ -2.34
CCDC42Q96M95 AL021368.1-201ENST00000607490 540 ntBASIC0.42□□□□□ -2.34
CCDC42Q96M95 AC097478.2-201ENST00000610572 514 ntBASIC0.42□□□□□ -2.34
CCDC42Q96M95 AC243994.1-201ENST00000618627 109 ntBASIC0.42□□□□□ -2.34
CCDC42Q96M95 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.42□□□□□ -2.34
CCDC42Q96M95 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CCDC42Q96M95 MIR1276-201ENST00000408707 83 ntBASIC0.41□□□□□ -2.34
CCDC42Q96M95 AC098934.3-201ENST00000430450 190 ntBASIC0.41□□□□□ -2.34
CCDC42Q96M95 AL035398.1-201ENST00000430869 322 ntBASIC0.41□□□□□ -2.34
CCDC42Q96M95 HMGN2P34-201ENST00000437647 269 ntBASIC0.41□□□□□ -2.34
CCDC42Q96M95 MTND3P1-201ENST00000441336 220 ntBASIC0.41□□□□□ -2.34
CCDC42Q96M95 AC016632.1-201ENST00000503994 196 ntBASIC0.41□□□□□ -2.34
CCDC42Q96M95 RNU6-567P-201ENST00000516746 107 ntBASIC0.41□□□□□ -2.34
CCDC42Q96M95 AC109479.2-201ENST00000517842 174 ntBASIC0.41□□□□□ -2.34
CCDC42Q96M95 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.41□□□□□ -2.34
CCDC42Q96M95 AC092451.2-201ENST00000538746 658 ntBASIC0.41□□□□□ -2.34
CCDC42Q96M95 MIR4781-201ENST00000585250 76 ntBASIC0.41□□□□□ -2.34
CCDC42Q96M95 Z98751.3-201ENST00000604447 521 ntBASIC0.41□□□□□ -2.34
CCDC42Q96M95 AC080013.3-201ENST00000606839 578 ntBASIC0.41□□□□□ -2.34
CCDC42Q96M95 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.41□□□□□ -2.34
CCDC42Q96M95 AL450472.1-202ENST00000637286 180 ntBASIC0.41□□□□□ -2.34
CCDC42Q96M95 RNU6-552P-201ENST00000362869 119 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 Y_RNA.191-201ENST00000363972 113 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 RNU6-39P-201ENST00000384344 107 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 MIR1283-1-201ENST00000408494 87 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 RNU2-39P-201ENST00000410604 198 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.4□□□□□ -2.35
CCDC42Q96M95 AC010154.1-201ENST00000425857 269 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 HSFY7P-201ENST00000432672 318 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 HSFY8P-201ENST00000437934 318 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 RPL22P17-201ENST00000438729 315 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.4□□□□□ -2.35
CCDC42Q96M95 AC117522.1-201ENST00000509821 380 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.4□□□□□ -2.35
CCDC42Q96M95 RNU6-1146P-201ENST00000516282 102 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 SNORA31.10-201ENST00000516482 106 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 RNU6-685P-201ENST00000517088 95 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.4□□□□□ -2.35
CCDC42Q96M95 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.4□□□□□ -2.35
CCDC42Q96M95 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.4□□□□□ -2.35
CCDC42Q96M95 AL512605.2-201ENST00000592972 256 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 AL390123.1-201ENST00000603216 237 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 AC013244.3-201ENST00000605614 388 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 MIR6504-201ENST00000613520 61 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 AC116165.2-201ENST00000616705 206 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 AL359740.1-201ENST00000624340 592 ntBASIC0.4□□□□□ -2.35
CCDC42Q96M95 ELL2P3-201ENST00000457883 1602 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-37P-201ENST00000362692 107 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-11P-201ENST00000364234 107 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-61P-201ENST00000365528 109 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-25P-201ENST00000383873 107 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-1-201ENST00000383898 107 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-48P-201ENST00000384161 107 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-36P-201ENST00000384172 107 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-4P-201ENST00000384205 107 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-5P-201ENST00000384238 107 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-3P-201ENST00000384314 107 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-16P-201ENST00000384385 107 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-15P-201ENST00000384534 107 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-2-201ENST00000384627 107 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-29P-201ENST00000384637 107 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-9-201ENST00000384776 107 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-33P-201ENST00000384793 107 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU2-72P-201ENST00000411175 163 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 MED13P1-201ENST00000428342 171 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.39□□□□□ -2.35
CCDC42Q96M95 AC013470.1-201ENST00000453438 462 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 MTCO2P29-201ENST00000465212 189 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.39□□□□□ -2.35
CCDC42Q96M95 AC113410.1-201ENST00000505029 247 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-6P-201ENST00000606623 107 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 AC064807.4-201ENST00000607201 407 ntBASIC0.39□□□□□ -2.35
CCDC42Q96M95 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.39□□□□□ -2.35
CCDC42Q96M95 RNU6-562P-201ENST00000362731 107 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 U3.8-201ENST00000363675 217 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 RNU6-1235P-201ENST00000384559 107 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 MIR558-201ENST00000384920 94 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 RN7SKP200-201ENST00000410564 320 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 RNU6-387P-201ENST00000411331 105 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 SNAP23P1-201ENST00000433229 246 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 FABP5P4-201ENST00000437203 171 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.38□□□□□ -2.35
CCDC42Q96M95 RNU7-21P-201ENST00000459430 62 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 RNU6-498P-201ENST00000459468 107 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 AC104982.1-201ENST00000478775 574 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 RNU6-948P-201ENST00000516374 107 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 AC023050.3-201ENST00000541142 333 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 MIR4753-201ENST00000585119 83 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 AL158211.2-201ENST00000607282 395 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 AL513423.1-201ENST00000621695 132 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.38□□□□□ -2.35
CCDC42Q96M95 MIR5087-201ENST00000635826 76 ntBASIC0.38□□□□□ -2.35
CCDC42Q96M95 RNU6-428P-201ENST00000362942 107 ntBASIC0.37□□□□□ -2.35
CCDC42Q96M95 Y_RNA.97-201ENST00000363094 102 ntBASIC0.37□□□□□ -2.35
CCDC42Q96M95 Y_RNA.324-201ENST00000365165 102 ntBASIC0.37□□□□□ -2.35
CCDC42Q96M95 SNORD41-201ENST00000386967 70 ntBASIC0.37□□□□□ -2.35
CCDC42Q96M95 MIR208B-201ENST00000401172 77 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms