Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC139712.2-201ENST00000424302 339 ntBASIC1.39□□□□□ -2.19
USP47Q96K76 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.39□□□□□ -2.19
USP47Q96K76 SCARNA18-201ENST00000459004 134 ntBASIC1.39□□□□□ -2.19
USP47Q96K76 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.39□□□□□ -2.19
USP47Q96K76 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.39□□□□□ -2.19
USP47Q96K76 AC097473.1-201ENST00000508142 408 ntBASIC1.39□□□□□ -2.19
USP47Q96K76 RNU6-445P-201ENST00000516949 107 ntBASIC1.39□□□□□ -2.19
USP47Q96K76 SNORA25.17-201ENST00000517184 124 ntBASIC1.39□□□□□ -2.19
USP47Q96K76 MIR5000-201ENST00000577717 103 ntBASIC1.39□□□□□ -2.19
USP47Q96K76 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
USP47Q96K76 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
USP47Q96K76 PIGFP2-201ENST00000421400 651 ntBASIC1.38□□□□□ -2.19
USP47Q96K76 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
USP47Q96K76 AC022364.2-201ENST00000457963 554 ntBASIC1.38□□□□□ -2.19
USP47Q96K76 RNA5SP269-201ENST00000459032 137 ntBASIC1.38□□□□□ -2.19
USP47Q96K76 MTCO3P28-201ENST00000513351 515 ntBASIC1.38□□□□□ -2.19
USP47Q96K76 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.38□□□□□ -2.19
USP47Q96K76 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.38□□□□□ -2.19
USP47Q96K76 AC012414.6-201ENST00000568241 401 ntBASIC1.38□□□□□ -2.19
USP47Q96K76 RSL24D1P11-201ENST00000591045 491 ntBASIC1.38□□□□□ -2.19
USP47Q96K76 VN1R107P-201ENST00000601784 209 ntBASIC1.38□□□□□ -2.19
USP47Q96K76 AC078795.3-201ENST00000602913 472 ntBASIC1.38□□□□□ -2.19
USP47Q96K76 PCGEM1.1-201ENST00000613431 131 ntBASIC1.38□□□□□ -2.19
USP47Q96K76 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
USP47Q96K76 MIR340-201ENST00000362125 95 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 RNU6-112P-201ENST00000363599 104 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 U3.9-201ENST00000363823 204 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 Y_RNA.393-201ENST00000383936 102 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 RNU6-378P-201ENST00000384324 107 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 SNORA12.2-201ENST00000391040 156 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 SNORA26.8-201ENST00000391306 124 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 RNU1-139P-201ENST00000391307 165 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 RN7SKP61-201ENST00000410642 295 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 AL117339.3-201ENST00000418733 162 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.37□□□□□ -2.19
USP47Q96K76 AL133396.1-201ENST00000432048 687 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.37□□□□□ -2.19
USP47Q96K76 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.37□□□□□ -2.19
USP47Q96K76 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.37□□□□□ -2.19
USP47Q96K76 AGGF1P4-201ENST00000568249 801 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 AL391646.1-201ENST00000603860 190 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 AL356157.2-201ENST00000605122 111 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 AC091931.1-201ENST00000623488 728 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 AC009161.2-201ENST00000624626 138 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.37□□□□□ -2.19
USP47Q96K76 FGF7P2-201ENST00000332473 296 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 Y_RNA.201-201ENST00000364052 96 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 Y_RNA.504-201ENST00000384481 104 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 RNU2-9P-201ENST00000410194 145 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 RNA5SP201-201ENST00000410316 124 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 RNU6-248P-201ENST00000410720 107 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.36□□□□□ -2.19
USP47Q96K76 RPL21P111-201ENST00000418453 477 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.36□□□□□ -2.19
USP47Q96K76 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.36□□□□□ -2.19
USP47Q96K76 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
USP47Q96K76 AC133104.1-201ENST00000429100 218 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 SNAP23P1-201ENST00000433229 246 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 AL445567.1-201ENST00000439121 144 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 RPS29P28-201ENST00000446439 141 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 AC112492.4-201ENST00000456549 352 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 snoU13.9-201ENST00000458927 103 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 RNU7-14P-201ENST00000459331 62 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.36□□□□□ -2.19
USP47Q96K76 RNU6-1098P-201ENST00000516772 96 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.36□□□□□ -2.19
USP47Q96K76 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.36□□□□□ -2.19
USP47Q96K76 AC008269.2-201ENST00000561915 1105 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 AC091304.6-201ENST00000619761 202 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 AC136475.10-201ENST00000620253 385 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.36□□□□□ -2.19
USP47Q96K76 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.36□□□□□ -2.19
USP47Q96K76 MTND4P14-201ENST00000435799 1354 ntBASIC1.36□□□□□ -2.19
USP47Q96K76 RNU6-552P-201ENST00000362869 119 ntBASIC1.35□□□□□ -2.19
USP47Q96K76 RNU6-266P-201ENST00000364225 107 ntBASIC1.35□□□□□ -2.19
USP47Q96K76 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
USP47Q96K76 POLR2J4-204ENST00000418424 324 ntBASIC1.35□□□□□ -2.19
USP47Q96K76 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.35□□□□□ -2.19
USP47Q96K76 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.35□□□□□ -2.19
USP47Q96K76 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.35□□□□□ -2.19
USP47Q96K76 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.35□□□□□ -2.19
USP47Q96K76 RPS27P1-201ENST00000450552 247 ntBASIC1.35□□□□□ -2.19
USP47Q96K76 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.35□□□□□ -2.19
USP47Q96K76 AC114801.2-201ENST00000503825 781 ntBASIC1.35□□□□□ -2.19
USP47Q96K76 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.35□□□□□ -2.19
USP47Q96K76 HMGN1P13-201ENST00000505795 138 ntBASIC1.35□□□□□ -2.19
USP47Q96K76 AC079140.5-201ENST00000507882 310 ntBASIC1.35□□□□□ -2.19
USP47Q96K76 AC025465.3-201ENST00000510570 311 ntBASIC1.35□□□□□ -2.19
USP47Q96K76 AC091874.1-201ENST00000511402 339 ntBASIC1.35□□□□□ -2.19
USP47Q96K76 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.35□□□□□ -2.19
USP47Q96K76 AP002963.1-201ENST00000530590 184 ntBASIC1.35□□□□□ -2.19
USP47Q96K76 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.35□□□□□ -2.19
USP47Q96K76 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.35□□□□□ -2.19
USP47Q96K76 AL603755.1-201ENST00000619504 163 ntBASIC1.35□□□□□ -2.19
USP47Q96K76 AC068205.3-201ENST00000636385 468 ntBASIC1.35□□□□□ -2.19
USP47Q96K76 AC092268.1-201ENST00000342691 405 ntBASIC1.34□□□□□ -2.19
USP47Q96K76 Y_RNA.67-201ENST00000362870 100 ntBASIC1.34□□□□□ -2.19
USP47Q96K76 SNORA32.2-201ENST00000384049 122 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms