Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL645939.1-201ENST00000453429 797 ntBASIC4.69□□□□□ -1.66
LRCH3Q96II8 AC023449.1-201ENST00000454464 154 ntBASIC4.69□□□□□ -1.66
LRCH3Q96II8 SNORD11-201ENST00000459124 84 ntBASIC4.69□□□□□ -1.66
LRCH3Q96II8 RNU1-95P-201ENST00000516357 160 ntBASIC4.69□□□□□ -1.66
LRCH3Q96II8 RNU1-128P-201ENST00000516704 160 ntBASIC4.69□□□□□ -1.66
LRCH3Q96II8 AL592437.2-201ENST00000421655 2434 ntBASIC4.69□□□□□ -1.66
LRCH3Q96II8 AL356489.2-201ENST00000566968 3528 ntBASIC4.69□□□□□ -1.66
LRCH3Q96II8 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.69□□□□□ -1.66
LRCH3Q96II8 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
LRCH3Q96II8 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRCH3Q96II8 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
LRCH3Q96II8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
LRCH3Q96II8 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.68□□□□□ -1.66
LRCH3Q96II8 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
LRCH3Q96II8 MIR302B-201ENST00000362188 73 ntBASIC4.68□□□□□ -1.66
LRCH3Q96II8 SNORA5A-201ENST00000384111 134 ntBASIC4.68□□□□□ -1.66
LRCH3Q96II8 MIR195-201ENST00000385194 87 ntBASIC4.68□□□□□ -1.66
LRCH3Q96II8 SNORD96B-201ENST00000386148 79 ntBASIC4.68□□□□□ -1.66
LRCH3Q96II8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.68□□□□□ -1.66
LRCH3Q96II8 AC099522.1-202ENST00000514718 367 ntBASIC4.68□□□□□ -1.66
LRCH3Q96II8 AC079587.1-201ENST00000603846 277 ntBASIC4.68□□□□□ -1.66
LRCH3Q96II8 Pinc.1-201ENST00000616452 154 ntBASIC4.68□□□□□ -1.66
LRCH3Q96II8 AC002064.3-201ENST00000623448 346 ntBASIC4.68□□□□□ -1.66
LRCH3Q96II8 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.68□□□□□ -1.66
LRCH3Q96II8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRCH3Q96II8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.68□□□□□ -1.66
LRCH3Q96II8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRCH3Q96II8 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRCH3Q96II8 CPHL1P-201ENST00000461341 3407 ntBASIC4.68□□□□□ -1.66
LRCH3Q96II8 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRCH3Q96II8 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRCH3Q96II8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
LRCH3Q96II8 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.67□□□□□ -1.66
LRCH3Q96II8 Y_RNA.93-201ENST00000363066 109 ntBASIC4.67□□□□□ -1.66
LRCH3Q96II8 RNY4P6-201ENST00000363667 96 ntBASIC4.67□□□□□ -1.66
LRCH3Q96II8 Y_RNA.198-201ENST00000364013 98 ntBASIC4.67□□□□□ -1.66
LRCH3Q96II8 RNU6-1296P-201ENST00000383879 107 ntBASIC4.67□□□□□ -1.66
LRCH3Q96II8 SNORA1-201ENST00000384107 130 ntBASIC4.67□□□□□ -1.66
LRCH3Q96II8 Y_RNA.486-201ENST00000384398 107 ntBASIC4.67□□□□□ -1.66
LRCH3Q96II8 SNORA1.3-201ENST00000384676 136 ntBASIC4.67□□□□□ -1.66
LRCH3Q96II8 RNU6-893P-201ENST00000458841 100 ntBASIC4.67□□□□□ -1.66
LRCH3Q96II8 snoU13.14-201ENST00000459372 104 ntBASIC4.67□□□□□ -1.66
LRCH3Q96II8 AC080013.2-201ENST00000460866 323 ntBASIC4.67□□□□□ -1.66
LRCH3Q96II8 AC022137.1-201ENST00000483735 151 ntBASIC4.67□□□□□ -1.66
LRCH3Q96II8 AC011406.1-201ENST00000512440 370 ntBASIC4.67□□□□□ -1.66
LRCH3Q96II8 RNU7-149P-201ENST00000516739 59 ntBASIC4.67□□□□□ -1.66
LRCH3Q96II8 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.67□□□□□ -1.66
LRCH3Q96II8 MIR6891-201ENST00000618788 93 ntBASIC4.67□□□□□ -1.66
LRCH3Q96II8 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.67□□□□□ -1.66
LRCH3Q96II8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.67□□□□□ -1.66
LRCH3Q96II8 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRCH3Q96II8 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.67□□□□□ -1.66
LRCH3Q96II8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRCH3Q96II8 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRCH3Q96II8 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRCH3Q96II8 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.66□□□□□ -1.66
LRCH3Q96II8 AL592182.3-201ENST00000642132 3304 ntBASIC4.66□□□□□ -1.66
LRCH3Q96II8 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.66□□□□□ -1.66
LRCH3Q96II8 RNA5SP432-201ENST00000362480 116 ntBASIC4.66□□□□□ -1.66
LRCH3Q96II8 MIR3065-201ENST00000390137 79 ntBASIC4.66□□□□□ -1.66
LRCH3Q96II8 RNA5SP511-201ENST00000410487 115 ntBASIC4.66□□□□□ -1.66
LRCH3Q96II8 AL161651.1-201ENST00000440882 223 ntBASIC4.66□□□□□ -1.66
LRCH3Q96II8 RPL27AP5-201ENST00000469428 449 ntBASIC4.66□□□□□ -1.66
LRCH3Q96II8 HMGN2P9-201ENST00000476875 229 ntBASIC4.66□□□□□ -1.66
LRCH3Q96II8 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.66□□□□□ -1.66
LRCH3Q96II8 HSPE1P18-201ENST00000517602 280 ntBASIC4.66□□□□□ -1.66
LRCH3Q96II8 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.66□□□□□ -1.66
LRCH3Q96II8 AC107294.3-201ENST00000609211 526 ntBASIC4.66□□□□□ -1.66
LRCH3Q96II8 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.66□□□□□ -1.66
LRCH3Q96II8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.66□□□□□ -1.66
LRCH3Q96II8 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRCH3Q96II8 AL133243.3-201ENST00000617415 3004 ntBASIC4.66□□□□□ -1.66
LRCH3Q96II8 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRCH3Q96II8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.66□□□□□ -1.66
LRCH3Q96II8 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LRCH3Q96II8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LRCH3Q96II8 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LRCH3Q96II8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
LRCH3Q96II8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRCH3Q96II8 RNU1-14P-201ENST00000362759 152 ntBASIC4.65□□□□□ -1.67
LRCH3Q96II8 Y_RNA.107-201ENST00000363190 121 ntBASIC4.65□□□□□ -1.67
LRCH3Q96II8 RNU4-13P-201ENST00000364019 141 ntBASIC4.65□□□□□ -1.67
LRCH3Q96II8 Y_RNA.203-201ENST00000364106 102 ntBASIC4.65□□□□□ -1.67
LRCH3Q96II8 RNU6-1138P-201ENST00000365359 106 ntBASIC4.65□□□□□ -1.67
LRCH3Q96II8 AL117342.1-201ENST00000404861 406 ntBASIC4.65□□□□□ -1.67
LRCH3Q96II8 RNA5SP20-201ENST00000515976 84 ntBASIC4.65□□□□□ -1.67
LRCH3Q96II8 RNU6-1073P-201ENST00000517182 106 ntBASIC4.65□□□□□ -1.67
LRCH3Q96II8 MIR2681-201ENST00000581814 105 ntBASIC4.65□□□□□ -1.67
LRCH3Q96II8 RPS15AP11-201ENST00000594193 385 ntBASIC4.65□□□□□ -1.67
LRCH3Q96II8 MIR3651-201ENST00000630427 90 ntBASIC4.65□□□□□ -1.67
LRCH3Q96II8 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.65□□□□□ -1.67
LRCH3Q96II8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LRCH3Q96II8 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LRCH3Q96II8 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LRCH3Q96II8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.65□□□□□ -1.67
LRCH3Q96II8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LRCH3Q96II8 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.65□□□□□ -1.67
LRCH3Q96II8 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.65□□□□□ -1.67
LRCH3Q96II8 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LRCH3Q96II8 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms