Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 RNU4-56P-201ENST00000364700 142 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 RNU6-593P-201ENST00000364716 112 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 RNU6-692P-201ENST00000384496 107 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 MIR517A-201ENST00000385001 87 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 SRIP3-201ENST00000413200 219 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 RPS15AP10-201ENST00000432472 382 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 AL353752.1-201ENST00000454946 260 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 PCMTD1P1-201ENST00000455560 355 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.635-201ENST00000459041 101 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.675-201ENST00000516389 149 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 BNIP3P16-201ENST00000589779 534 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 AC018462.2-201ENST00000605375 395 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 AP000654.2-201ENST00000605633 586 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 AC124303.1-201ENST00000605703 360 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 AL162373.1-201ENST00000620433 407 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 AC241585.2-209ENST00000638217 143 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 AC006026.1-201ENST00000444025 1803 ntBASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.11□□□□□ -2.07
PDLIM5Q96HC4 AC009487.4-201ENST00000624969 3585 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 SNORD115-3-201ENST00000363100 82 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 RNU6-1059P-201ENST00000363752 98 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 RNA5SP37-201ENST00000365420 130 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 XGY1-201ENST00000381172 446 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.404-201ENST00000383978 102 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 RNU6-842P-201ENST00000384269 107 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.473-201ENST00000384333 102 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 RNU6-601P-201ENST00000384540 107 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.535-201ENST00000384612 99 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 RNU6-1106P-201ENST00000390845 107 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 BTF3L4P2-201ENST00000392798 346 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 RNU6-1050P-201ENST00000410388 107 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.597-201ENST00000410463 100 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 RN7SKP284-201ENST00000411002 343 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 RNU6-1304P-201ENST00000411374 106 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 AF228730.4-201ENST00000421457 183 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 AL356320.1-201ENST00000429616 163 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 PRELID3BP1-201ENST00000457142 540 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 RNU6-559P-201ENST00000516151 98 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.670-201ENST00000516255 105 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 RNU6-612P-201ENST00000516909 102 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.718-201ENST00000517110 102 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 RNU1-54P-201ENST00000517181 120 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 AC011494.1-201ENST00000596454 237 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 AP001836.1-201ENST00000604675 523 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 MIR3976-201ENST00000606807 139 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 MTND4LP32-201ENST00000636111 270 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 MTND4P29-201ENST00000503122 1372 ntBASIC2.1□□□□□ -2.07
PDLIM5Q96HC4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 RNU6-1188P-201ENST00000363795 107 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 RNU6-944P-201ENST00000364023 107 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 SNORD32A-201ENST00000364805 84 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 RNU6-596P-201ENST00000365395 98 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.384-201ENST00000383909 102 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 RNA5SP465-201ENST00000391195 109 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 Y_RNA.594-201ENST00000410373 140 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 RNU6-370P-201ENST00000411008 104 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 AL356379.1-201ENST00000414105 126 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 AL133396.1-201ENST00000432048 687 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 RPL23AP6-201ENST00000446637 472 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 SNORD19B-201ENST00000459623 84 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 RNU6-1016P-201ENST00000516689 94 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 AC007375.1-201ENST00000554513 578 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 MIR3136-201ENST00000583498 78 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 AL050343.2-201ENST00000607338 280 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 AL627230.6-201ENST00000611129 280 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 MIR8076-201ENST00000611401 83 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 AL132822.1-201ENST00000617063 513 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 SCARNA15.3-201ENST00000626315 122 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms