Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 OOSP1P1-201ENST00000423265 274 ntBASIC3.26□□□□□ -1.89
CHFRQ96EP1 AC104332.2-201ENST00000429959 156 ntBASIC3.26□□□□□ -1.89
CHFRQ96EP1 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.26□□□□□ -1.89
CHFRQ96EP1 RNU5F-8P-201ENST00000515941 111 ntBASIC3.26□□□□□ -1.89
CHFRQ96EP1 RNU6-426P-201ENST00000516464 97 ntBASIC3.26□□□□□ -1.89
CHFRQ96EP1 MIR2276-201ENST00000516886 89 ntBASIC3.26□□□□□ -1.89
CHFRQ96EP1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.26□□□□□ -1.89
CHFRQ96EP1 RPL21P9-201ENST00000556149 474 ntBASIC3.26□□□□□ -1.89
CHFRQ96EP1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.26□□□□□ -1.89
CHFRQ96EP1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.26□□□□□ -1.89
CHFRQ96EP1 AC010928.2-201ENST00000588017 287 ntBASIC3.26□□□□□ -1.89
CHFRQ96EP1 AC060766.3-201ENST00000591442 263 ntBASIC3.26□□□□□ -1.89
CHFRQ96EP1 AC005046.1-201ENST00000608515 625 ntBASIC3.26□□□□□ -1.89
CHFRQ96EP1 AC107294.3-201ENST00000609211 526 ntBASIC3.26□□□□□ -1.89
CHFRQ96EP1 AL353748.2-201ENST00000622148 471 ntBASIC3.26□□□□□ -1.89
CHFRQ96EP1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.26□□□□□ -1.89
CHFRQ96EP1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.26□□□□□ -1.89
CHFRQ96EP1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHFRQ96EP1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.26□□□□□ -1.89
CHFRQ96EP1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.25□□□□□ -1.89
CHFRQ96EP1 AC091564.4-201ENST00000533934 2194 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 SNORA25.1-201ENST00000362326 128 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 Y_RNA.123-201ENST00000363338 102 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 Y_RNA.215-201ENST00000364204 112 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 RNU6-512P-201ENST00000364438 103 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 Y_RNA.273-201ENST00000364703 102 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 RNU6-76P-201ENST00000384060 104 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 Y_RNA.597-201ENST00000410463 100 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.25□□□□□ -1.89
CHFRQ96EP1 AC010154.1-201ENST00000425857 269 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.25□□□□□ -1.89
CHFRQ96EP1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.25□□□□□ -1.89
CHFRQ96EP1 AC006445.2-201ENST00000510061 472 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.25□□□□□ -1.89
CHFRQ96EP1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 SNORA27.4-201ENST00000516650 95 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 RNU6-840P-201ENST00000517275 65 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 MIR4513-201ENST00000581077 86 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 AL161629.2-201ENST00000615347 275 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 AC073349.3-201ENST00000617616 186 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHFRQ96EP1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.25□□□□□ -1.89
CHFRQ96EP1 AL035425.3-201ENST00000564206 4996 ntBASIC3.25□□□□□ -1.89
CHFRQ96EP1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.25□□□□□ -1.89
CHFRQ96EP1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHFRQ96EP1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.25□□□□□ -1.89
CHFRQ96EP1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
CHFRQ96EP1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.24□□□□□ -1.89
CHFRQ96EP1 AC008568.2-201ENST00000623862 2313 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CHFRQ96EP1 MIR30E-201ENST00000362104 92 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 Y_RNA.33-201ENST00000362591 102 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 RNU5A-1-201ENST00000362698 116 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 RNU6-805P-201ENST00000365643 106 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 AP002088.1-201ENST00000382740 395 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 RNU6-449P-201ENST00000383914 107 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 SNORA36C-201ENST00000384289 132 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CHFRQ96EP1 RNA5SP213-201ENST00000391031 106 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 RN7SKP220-201ENST00000410611 288 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 CR769767.1-201ENST00000436337 346 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 RPL23AP58-201ENST00000440453 469 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 AC008267.6-201ENST00000441664 139 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 AC016700.2-201ENST00000446011 156 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 AC009237.7-201ENST00000447357 229 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 UQCRBP2-201ENST00000447827 297 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 AC021205.2-201ENST00000480069 347 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 RPL26P26-201ENST00000480251 434 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.24□□□□□ -1.89
CHFRQ96EP1 RPL30P1-201ENST00000488676 339 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 AL160314.1-201ENST00000490836 438 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 AK3P2-201ENST00000507976 429 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 RNU6-927P-201ENST00000516199 100 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 SNORA70.16-201ENST00000516390 95 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 SNORD116-25-201ENST00000516517 92 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 RNU6-919P-201ENST00000516731 104 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CHFRQ96EP1 AP000867.2-201ENST00000532468 320 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.24□□□□□ -1.89
CHFRQ96EP1 RPL23AP88-201ENST00000605759 454 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 AC037487.3-201ENST00000606668 112 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 MIR7106-201ENST00000612419 65 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 uc_338.25-201ENST00000613756 156 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.24□□□□□ -1.89
CHFRQ96EP1 AC099506.2-201ENST00000623074 221 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 AC099654.7-201ENST00000635788 2127 ntBASIC3.24□□□□□ -1.89
CHFRQ96EP1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.23□□□□□ -1.89
CHFRQ96EP1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CHFRQ96EP1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CHFRQ96EP1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
CHFRQ96EP1 RNU6-1298P-201ENST00000362456 101 ntBASIC3.23□□□□□ -1.89
CHFRQ96EP1 RNU6-227P-201ENST00000362865 103 ntBASIC3.23□□□□□ -1.89
CHFRQ96EP1 SNORD14B-201ENST00000364533 90 ntBASIC3.23□□□□□ -1.89
CHFRQ96EP1 RNU6-395P-201ENST00000365662 106 ntBASIC3.23□□□□□ -1.89
CHFRQ96EP1 MIR569-201ENST00000385228 96 ntBASIC3.23□□□□□ -1.89
CHFRQ96EP1 RNA5SP31-201ENST00000411144 127 ntBASIC3.23□□□□□ -1.89
CHFRQ96EP1 RPL23AP82-202ENST00000427528 469 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms