Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SEH1LQ96EE3 MTCO2P18-201ENST00000457151 658 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 MTCO3P38-201ENST00000468910 766 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.29□□□□□ -2.2
SEH1LQ96EE3 FO393415.2-201ENST00000480085 343 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.29□□□□□ -2.2
SEH1LQ96EE3 AC008628.2-201ENST00000502605 298 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 AC091435.1-201ENST00000505442 584 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 SNORA14.1-201ENST00000516113 141 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 RNU6-189P-201ENST00000516120 101 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 SUMO2P18-201ENST00000518873 252 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.29□□□□□ -2.2
SEH1LQ96EE3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.29□□□□□ -2.2
SEH1LQ96EE3 AL158211.1-201ENST00000566763 763 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.29□□□□□ -2.2
SEH1LQ96EE3 MIR3611-201ENST00000584484 83 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 AC005786.1-201ENST00000588553 154 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 AC016925.2-201ENST00000605108 242 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 BX248123.2-201ENST00000606318 124 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 RN7SKP299-201ENST00000606679 301 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 AL121757.2-201ENST00000611223 313 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 AC139792.3-201ENST00000623525 224 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 SNORA43.4-201ENST00000629559 138 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 AL450472.1-202ENST00000637286 180 ntBASIC1.29□□□□□ -2.2
SEH1LQ96EE3 SNORA18.2-201ENST00000383865 132 ntBASIC1.28□□□□□ -2.2
SEH1LQ96EE3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
SEH1LQ96EE3 SNORA26.3-201ENST00000391119 136 ntBASIC1.28□□□□□ -2.2
SEH1LQ96EE3 AL663109.1-201ENST00000411498 844 ntBASIC1.28□□□□□ -2.2
SEH1LQ96EE3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.28□□□□□ -2.2
SEH1LQ96EE3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.28□□□□□ -2.2
SEH1LQ96EE3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.28□□□□□ -2.2
SEH1LQ96EE3 MTCO2P3-201ENST00000442543 421 ntBASIC1.28□□□□□ -2.2
SEH1LQ96EE3 AMD1P1-201ENST00000457220 922 ntBASIC1.28□□□□□ -2.2
SEH1LQ96EE3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.28□□□□□ -2.2
SEH1LQ96EE3 AC005908.1-201ENST00000468701 347 ntBASIC1.28□□□□□ -2.2
SEH1LQ96EE3 RPS23P5-201ENST00000495419 428 ntBASIC1.28□□□□□ -2.2
SEH1LQ96EE3 AC108078.1-201ENST00000508073 725 ntBASIC1.28□□□□□ -2.2
SEH1LQ96EE3 MTND1P15-201ENST00000579262 949 ntBASIC1.28□□□□□ -2.2
SEH1LQ96EE3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.28□□□□□ -2.2
SEH1LQ96EE3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.28□□□□□ -2.2
SEH1LQ96EE3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.28□□□□□ -2.2
SEH1LQ96EE3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
SEH1LQ96EE3 AL159152.1-201ENST00000635019 2587 ntBASIC1.28□□□□□ -2.2
SEH1LQ96EE3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
SEH1LQ96EE3 RNU6-545P-201ENST00000362681 104 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 Y_RNA.77-201ENST00000362962 107 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 RNU4-13P-201ENST00000364019 141 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 Y_RNA.378-201ENST00000365652 113 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 RNU6-877P-201ENST00000383868 107 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 RNU6-1103P-201ENST00000384150 107 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 RNY3P9-201ENST00000384727 106 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 MIR30A-201ENST00000385092 71 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SEH1LQ96EE3 AL357134.1-201ENST00000445848 426 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.27□□□□□ -2.21
SEH1LQ96EE3 HMGB1P29-201ENST00000505659 499 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 FAM206BP-201ENST00000510179 541 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 RNA5SP61-201ENST00000516453 100 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 SNORA44.1-201ENST00000517031 108 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.27□□□□□ -2.21
SEH1LQ96EE3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.27□□□□□ -2.21
SEH1LQ96EE3 AP005136.1-201ENST00000579765 429 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 AC087683.1-201ENST00000591187 441 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 AC064836.2-201ENST00000609491 462 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 MIR7974-201ENST00000615835 79 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 AC022513.1-201ENST00000624512 117 ntBASIC1.27□□□□□ -2.21
SEH1LQ96EE3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SEH1LQ96EE3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
SEH1LQ96EE3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.26□□□□□ -2.21
SEH1LQ96EE3 MIR340-201ENST00000362125 95 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 RNU6-1317P-201ENST00000364582 104 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 RNU6-60P-201ENST00000364792 103 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 MIR549A-201ENST00000385268 96 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 DEFB108C-201ENST00000400154 252 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 RNU2-7P-201ENST00000410794 178 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 CDK8P2-201ENST00000415020 547 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 AL513185.2-201ENST00000425543 193 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 AL354695.1-201ENST00000427935 228 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 USP9YP28-201ENST00000435142 589 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 TPT1P7-201ENST00000458300 517 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 RNU1-131P-201ENST00000458943 161 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 snoU13.30-201ENST00000458951 104 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 RNU6-1037P-201ENST00000459571 107 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 RPL9P9-202ENST00000466501 579 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 AC079140.3-201ENST00000511111 550 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.26□□□□□ -2.21
SEH1LQ96EE3 CENPUP1-201ENST00000526649 1202 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 AP005597.4-201ENST00000526762 229 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 AC087441.2-201ENST00000529141 262 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.26□□□□□ -2.21
SEH1LQ96EE3 AL118558.2-201ENST00000556294 238 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.26□□□□□ -2.21
SEH1LQ96EE3 SNORD53B-201ENST00000577887 78 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 AL161722.3-201ENST00000605789 2983 ntBASIC1.26□□□□□ -2.21
SEH1LQ96EE3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.26□□□□□ -2.21
SEH1LQ96EE3 Y_RNA.123-201ENST00000363338 102 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms