Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 Y_RNA.715-201ENST00000517082 110 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 Y_RNA.721-201ENST00000517207 102 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 AC022616.4-201ENST00000522985 181 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.53□□□□□ -2
RTP4Q96DX8 AC025281.1-201ENST00000567026 265 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.53□□□□□ -2
RTP4Q96DX8 AC009163.5-201ENST00000575421 637 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 MIR3671-201ENST00000580455 88 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 MIR3149-201ENST00000584629 83 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.53□□□□□ -2
RTP4Q96DX8 VN1R91P-201ENST00000594377 169 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 AC010205.1-201ENST00000616668 449 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 U2.1-201ENST00000618978 145 ntBASIC2.53□□□□□ -2
RTP4Q96DX8 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
RTP4Q96DX8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
RTP4Q96DX8 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.53□□□□□ -2
RTP4Q96DX8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.53□□□□□ -2
RTP4Q96DX8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RTP4Q96DX8 RBBP8P1-201ENST00000449447 1844 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.52□□□□□ -2.01
RTP4Q96DX8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
RTP4Q96DX8 Y_RNA.149-201ENST00000363558 117 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 Y_RNA.222-201ENST00000364264 102 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 Y_RNA.358-201ENST00000365491 99 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 SNORA69.1-201ENST00000390904 137 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 RNU6-1109P-201ENST00000391187 107 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 MIR190B-201ENST00000401119 79 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 MIR1252-201ENST00000408861 65 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.52□□□□□ -2.01
RTP4Q96DX8 AC007098.1-201ENST00000420122 367 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.52□□□□□ -2.01
RTP4Q96DX8 AL161651.1-201ENST00000440882 223 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RTP4Q96DX8 AL513124.1-201ENST00000450410 614 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.52□□□□□ -2.01
RTP4Q96DX8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.52□□□□□ -2.01
RTP4Q96DX8 TRBV12-1-201ENST00000479785 344 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.52□□□□□ -2.01
RTP4Q96DX8 RNA5SP320-201ENST00000516263 124 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.52□□□□□ -2.01
RTP4Q96DX8 RAC1P9-201ENST00000604990 392 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 AC019159.1-201ENST00000605094 187 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 AL121655.1-201ENST00000605811 308 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 AC067747.1-201ENST00000608026 250 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 AL021879.1-201ENST00000611756 288 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 AL590808.1-201ENST00000618696 141 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.52□□□□□ -2.01
RTP4Q96DX8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.52□□□□□ -2.01
RTP4Q96DX8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RTP4Q96DX8 AC233981.2-201ENST00000611524 1614 ntBASIC2.52□□□□□ -2.01
RTP4Q96DX8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.52□□□□□ -2.01
RTP4Q96DX8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
RTP4Q96DX8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RTP4Q96DX8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
RTP4Q96DX8 RNU6-222P-201ENST00000362438 107 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 RNU6-968P-201ENST00000384076 107 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 Y_RNA.452-201ENST00000384202 108 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 RNU6-843P-201ENST00000384454 104 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 SNORA67.4-201ENST00000384688 142 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 MIR767-201ENST00000390228 109 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 RPL21P1-201ENST00000399532 476 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 RNA5SP181-201ENST00000410246 98 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 AC114482.1-201ENST00000418010 247 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 ELOCP20-201ENST00000422460 345 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 RPL23AP95-201ENST00000426806 265 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.51□□□□□ -2.01
RTP4Q96DX8 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.51□□□□□ -2.01
RTP4Q96DX8 MTCO3P8-201ENST00000453691 755 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 AC006026.2-201ENST00000457376 180 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 RN7SKP210-201ENST00000459176 261 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 RNU7-87P-201ENST00000459343 62 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 RPL30P12-201ENST00000474666 353 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 RNU6-397P-201ENST00000516226 104 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 AC144568.1-201ENST00000520139 137 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.51□□□□□ -2.01
RTP4Q96DX8 AC090517.1-201ENST00000569307 266 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 AC104581.2-201ENST00000572227 430 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 AC010620.2-201ENST00000600135 313 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 AC016727.2-201ENST00000603988 621 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 AL355297.3-201ENST00000604082 446 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 Z98751.3-201ENST00000604447 521 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 AC024581.2-201ENST00000619986 252 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 U4.3-201ENST00000621047 82 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 AC002064.3-201ENST00000623448 346 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 MIR3199-2-201ENST00000636243 86 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 AL450472.1-202ENST00000637286 180 ntBASIC2.51□□□□□ -2.01
RTP4Q96DX8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.51□□□□□ -2.01
RTP4Q96DX8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RTP4Q96DX8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
RTP4Q96DX8 Y_RNA.176-201ENST00000363815 109 ntBASIC2.5□□□□□ -2.01
RTP4Q96DX8 Y_RNA.214-201ENST00000364201 112 ntBASIC2.5□□□□□ -2.01
RTP4Q96DX8 RNU6-1286P-201ENST00000383871 107 ntBASIC2.5□□□□□ -2.01
RTP4Q96DX8 SNORA29-201ENST00000384183 140 ntBASIC2.5□□□□□ -2.01
RTP4Q96DX8 RNU6-622P-201ENST00000384272 103 ntBASIC2.5□□□□□ -2.01
RTP4Q96DX8 SNORA51.11-201ENST00000384442 131 ntBASIC2.5□□□□□ -2.01
RTP4Q96DX8 AL139095.1-201ENST00000404326 391 ntBASIC2.5□□□□□ -2.01
RTP4Q96DX8 RNU6-130P-201ENST00000411112 103 ntBASIC2.5□□□□□ -2.01
RTP4Q96DX8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.5□□□□□ -2.01
RTP4Q96DX8 AC004383.1-201ENST00000438135 289 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms