Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 AC000403.1-201ENST00000613696 3585 ntBASIC3.69□□□□□ -1.82
RNF34Q969K3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF34Q969K3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF34Q969K3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF34Q969K3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
RNF34Q969K3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF34Q969K3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
RNF34Q969K3 AC080128.1-201ENST00000474389 1917 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 RNU1-72P-201ENST00000362976 153 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 SNORD32B-201ENST00000364460 84 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 Y_RNA.352-201ENST00000365439 102 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RNF34Q969K3 U3.39-201ENST00000408569 239 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 RNU2-64P-201ENST00000411315 191 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF34Q969K3 RPL23AP58-201ENST00000440453 469 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 AC009237.7-201ENST00000447357 229 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 RNU6-625P-201ENST00000459412 107 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 AC117440.1-201ENST00000474107 571 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 AC110768.1-201ENST00000509222 400 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 RNU6-344P-201ENST00000516635 111 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 RNU6-579P-201ENST00000516879 102 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 RNU6-586P-201ENST00000517265 104 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 AP006245.1-201ENST00000522549 120 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF34Q969K3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF34Q969K3 AC018448.1-201ENST00000552843 316 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 TGIF1P1-201ENST00000558095 802 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 SNORD11B-201ENST00000607707 90 ntBASIC3.68□□□□□ -1.82
RNF34Q969K3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF34Q969K3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF34Q969K3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF34Q969K3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF34Q969K3 AL021368.2-201ENST00000606125 5352 ntBASIC3.67□□□□□ -1.82
RNF34Q969K3 RNA5SP42-201ENST00000364278 115 ntBASIC3.67□□□□□ -1.82
RNF34Q969K3 Y_RNA.230-201ENST00000364348 109 ntBASIC3.67□□□□□ -1.82
RNF34Q969K3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.67□□□□□ -1.82
RNF34Q969K3 PRSS3P4-201ENST00000453323 162 ntBASIC3.67□□□□□ -1.82
RNF34Q969K3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF34Q969K3 DEFB131C-201ENST00000528817 165 ntBASIC3.67□□□□□ -1.82
RNF34Q969K3 AK6P2-201ENST00000549020 471 ntBASIC3.67□□□□□ -1.82
RNF34Q969K3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF34Q969K3 MIR5047-201ENST00000579212 100 ntBASIC3.67□□□□□ -1.82
RNF34Q969K3 AC092628.2-201ENST00000622492 339 ntBASIC3.67□□□□□ -1.82
RNF34Q969K3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF34Q969K3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF34Q969K3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF34Q969K3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RNF34Q969K3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
RNF34Q969K3 RNA5SP119-201ENST00000362715 117 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 Y_RNA.269-201ENST00000364685 89 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 RNU6-200P-201ENST00000364743 107 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 RNU6-290P-201ENST00000365212 101 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 RNU6-1274P-201ENST00000384557 107 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 MIR1294-201ENST00000408503 142 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 AL390729.2-201ENST00000416137 156 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 CYCSP35-201ENST00000451978 304 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF34Q969K3 RPL7P49-201ENST00000471402 708 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 RPS23P5-201ENST00000495419 428 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 SEPT14P8-201ENST00000508026 178 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 AC023141.11-201ENST00000508864 202 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 AC022080.3-201ENST00000544433 482 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 AC130289.1-201ENST00000577321 73 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 MIR4643-201ENST00000577473 78 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF34Q969K3 AC005176.2-201ENST00000596933 147 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 AC009779.6-201ENST00000603972 165 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 SNORD113-5-201ENST00000607261 78 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 MIR5739-201ENST00000619803 80 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 AC244205.2-202ENST00000635781 342 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF34Q969K3 AC135776.4-201ENST00000624300 1904 ntBASIC3.66□□□□□ -1.82
RNF34Q969K3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RNF34Q969K3 PWAR6-201ENST00000552334 4618 ntBASIC3.65□□□□□ -1.82
RNF34Q969K3 SNORA71.3-201ENST00000362582 128 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 RNU4-90P-201ENST00000362773 141 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 RNA5SP50-201ENST00000363731 107 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 RNU6-283P-201ENST00000364788 107 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 RNU6-21P-201ENST00000384710 107 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 SNORA48.8-201ENST00000391324 134 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 MIR548I3-201ENST00000408378 149 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 MIR548I1-201ENST00000408810 149 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 CYCSP4-201ENST00000429682 331 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 AC080013.2-201ENST00000460866 323 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 RN7SL330P-201ENST00000469709 307 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 AC025518.1-201ENST00000479856 347 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 CKS1BP2-201ENST00000497342 240 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 AC083906.5-201ENST00000503722 328 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 RNU7-110P-201ENST00000516891 62 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 MIR3922-201ENST00000585192 84 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF34Q969K3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.65□□□□□ -1.83
RNF34Q969K3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF34Q969K3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
RNF34Q969K3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RNF34Q969K3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF34Q969K3 RNU1-75P-201ENST00000347264 129 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms