Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NPIPB3Q92617 SNORA46-201ENST00000384762 135 ntBASIC2.49□□□□□ -2.01
NPIPB3Q92617 AC004866.1-201ENST00000411748 78 ntBASIC2.49□□□□□ -2.01
NPIPB3Q92617 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.49□□□□□ -2.01
NPIPB3Q92617 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.49□□□□□ -2.01
NPIPB3Q92617 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.49□□□□□ -2.01
NPIPB3Q92617 AC010095.1-201ENST00000443543 144 ntBASIC2.49□□□□□ -2.01
NPIPB3Q92617 IFNA11P-201ENST00000446352 526 ntBASIC2.49□□□□□ -2.01
NPIPB3Q92617 AL133547.1-201ENST00000448546 220 ntBASIC2.49□□□□□ -2.01
NPIPB3Q92617 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.49□□□□□ -2.01
NPIPB3Q92617 AC010469.2-201ENST00000496412 480 ntBASIC2.49□□□□□ -2.01
NPIPB3Q92617 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.49□□□□□ -2.01
NPIPB3Q92617 MIR449C-201ENST00000516047 92 ntBASIC2.49□□□□□ -2.01
NPIPB3Q92617 RNU6-965P-201ENST00000516721 96 ntBASIC2.49□□□□□ -2.01
NPIPB3Q92617 RNU1-45P-201ENST00000517191 141 ntBASIC2.49□□□□□ -2.01
NPIPB3Q92617 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.49□□□□□ -2.01
NPIPB3Q92617 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.49□□□□□ -2.01
NPIPB3Q92617 AC106785.1-201ENST00000565935 262 ntBASIC2.49□□□□□ -2.01
NPIPB3Q92617 MIR4506-201ENST00000584693 77 ntBASIC2.49□□□□□ -2.01
NPIPB3Q92617 AC136443.5-201ENST00000603741 370 ntBASIC2.49□□□□□ -2.01
NPIPB3Q92617 AC073657.2-201ENST00000605661 303 ntBASIC2.49□□□□□ -2.01
NPIPB3Q92617 uc_338.25-201ENST00000613756 156 ntBASIC2.49□□□□□ -2.01
NPIPB3Q92617 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.49□□□□□ -2.01
NPIPB3Q92617 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.49□□□□□ -2.01
NPIPB3Q92617 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NPIPB3Q92617 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
NPIPB3Q92617 Y_RNA.459-201ENST00000384251 102 ntBASIC2.48□□□□□ -2.01
NPIPB3Q92617 Y_RNA.471-201ENST00000384312 102 ntBASIC2.48□□□□□ -2.01
NPIPB3Q92617 MIR554-201ENST00000384874 96 ntBASIC2.48□□□□□ -2.01
NPIPB3Q92617 RNA5SP492-201ENST00000411330 114 ntBASIC2.48□□□□□ -2.01
NPIPB3Q92617 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.48□□□□□ -2.01
NPIPB3Q92617 U8.20-201ENST00000459445 131 ntBASIC2.48□□□□□ -2.01
NPIPB3Q92617 RN7SL75P-201ENST00000461926 281 ntBASIC2.48□□□□□ -2.01
NPIPB3Q92617 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.48□□□□□ -2.01
NPIPB3Q92617 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.48□□□□□ -2.01
NPIPB3Q92617 AC026403.1-201ENST00000518938 295 ntBASIC2.48□□□□□ -2.01
NPIPB3Q92617 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.48□□□□□ -2.01
NPIPB3Q92617 MZT1P2-201ENST00000604387 248 ntBASIC2.48□□□□□ -2.01
NPIPB3Q92617 Y_RNA.772-201ENST00000606692 102 ntBASIC2.48□□□□□ -2.01
NPIPB3Q92617 AL021879.1-201ENST00000611756 288 ntBASIC2.48□□□□□ -2.01
NPIPB3Q92617 AC010205.1-201ENST00000616668 449 ntBASIC2.48□□□□□ -2.01
NPIPB3Q92617 AL078596.1-201ENST00000624856 447 ntBASIC2.48□□□□□ -2.01
NPIPB3Q92617 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.48□□□□□ -2.01
NPIPB3Q92617 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.47□□□□□ -2.01
NPIPB3Q92617 RNU6-727P-201ENST00000363592 107 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 RNU6-1026P-201ENST00000384465 108 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
NPIPB3Q92617 AL033519.2-201ENST00000403958 392 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 MRPL35P1-201ENST00000404272 572 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 AL357139.1-201ENST00000407792 426 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.47□□□□□ -2.01
NPIPB3Q92617 DPH3P2-201ENST00000422618 250 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPB3Q92617 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPB3Q92617 RPEP5-201ENST00000441137 268 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPB3Q92617 UQCRBP2-201ENST00000447827 297 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 PCNPP5-201ENST00000452246 481 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 RNU7-14P-201ENST00000459331 62 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 RPL21P10-201ENST00000463521 490 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 AC067942.3-201ENST00000512025 362 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 AC074133.1-201ENST00000515696 183 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.47□□□□□ -2.01
NPIPB3Q92617 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.47□□□□□ -2.01
NPIPB3Q92617 MIR4659A-201ENST00000580269 81 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 MIR2682-201ENST00000580305 110 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 U3.45-201ENST00000607547 219 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 AC068205.3-201ENST00000636385 468 ntBASIC2.47□□□□□ -2.01
NPIPB3Q92617 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
NPIPB3Q92617 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
NPIPB3Q92617 AC093831.2-201ENST00000624393 3427 ntBASIC2.46□□□□□ -2.01
NPIPB3Q92617 AC135776.4-201ENST00000624300 1904 ntBASIC2.46□□□□□ -2.02
NPIPB3Q92617 Y_RNA.153-201ENST00000363615 91 ntBASIC2.46□□□□□ -2.02
NPIPB3Q92617 RNU6-926P-201ENST00000384075 107 ntBASIC2.46□□□□□ -2.02
NPIPB3Q92617 Y_RNA.458-201ENST00000384240 102 ntBASIC2.46□□□□□ -2.02
NPIPB3Q92617 MIR300-201ENST00000401138 83 ntBASIC2.46□□□□□ -2.02
NPIPB3Q92617 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.46□□□□□ -2.02
NPIPB3Q92617 RN7SKP123-201ENST00000410732 291 ntBASIC2.46□□□□□ -2.02
NPIPB3Q92617 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.46□□□□□ -2.02
NPIPB3Q92617 AC073910.1-201ENST00000445047 438 ntBASIC2.46□□□□□ -2.02
NPIPB3Q92617 SNORA40.9-201ENST00000515895 93 ntBASIC2.46□□□□□ -2.02
NPIPB3Q92617 RPPH1-2P-201ENST00000516688 293 ntBASIC2.46□□□□□ -2.02
NPIPB3Q92617 AC131281.1-201ENST00000522984 164 ntBASIC2.46□□□□□ -2.02
NPIPB3Q92617 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.46□□□□□ -2.02
NPIPB3Q92617 AC240442.1-201ENST00000616055 283 ntBASIC2.46□□□□□ -2.02
NPIPB3Q92617 AC039056.2-201ENST00000622261 511 ntBASIC2.46□□□□□ -2.02
NPIPB3Q92617 AC008873.1-201ENST00000625051 138 ntBASIC2.46□□□□□ -2.02
NPIPB3Q92617 AC008264.2-201ENST00000610193 3731 ntBASIC2.46□□□□□ -2.02
NPIPB3Q92617 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NPIPB3Q92617 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NPIPB3Q92617 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NPIPB3Q92617 AC073346.2-201ENST00000624724 2058 ntBASIC2.45□□□□□ -2.02
NPIPB3Q92617 SNORA25B-201ENST00000365507 128 ntBASIC2.45□□□□□ -2.02
NPIPB3Q92617 Y_RNA.439-201ENST00000384119 94 ntBASIC2.45□□□□□ -2.02
NPIPB3Q92617 RNU6-611P-201ENST00000384276 104 ntBASIC2.45□□□□□ -2.02
NPIPB3Q92617 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NPIPB3Q92617 RNA5SP274-201ENST00000410484 108 ntBASIC2.45□□□□□ -2.02
NPIPB3Q92617 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.45□□□□□ -2.02
NPIPB3Q92617 AC009238.1-201ENST00000442165 424 ntBASIC2.45□□□□□ -2.02
NPIPB3Q92617 AC009237.6-201ENST00000446969 424 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms