Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
LMX1AQ8TE12 AF246928.1-201ENST00000623768 87 ntBASIC0.98□□□□□ -2.25
LMX1AQ8TE12 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
LMX1AQ8TE12 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.97□□□□□ -2.25
LMX1AQ8TE12 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.97□□□□□ -2.25
LMX1AQ8TE12 FGF7P2-201ENST00000332473 296 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 AC092268.1-201ENST00000342691 405 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 RNU4-38P-201ENST00000364472 129 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 RNU6-282P-201ENST00000365357 103 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 SNORD70.1-201ENST00000391007 85 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 MIR548J-201ENST00000408833 112 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 AL031667.1-201ENST00000440222 725 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.97□□□□□ -2.25
LMX1AQ8TE12 PRPS1P1-201ENST00000445305 876 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.97□□□□□ -2.25
LMX1AQ8TE12 AL133217.1-201ENST00000450980 425 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.97□□□□□ -2.25
LMX1AQ8TE12 RPS26P55-201ENST00000471178 356 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.97□□□□□ -2.25
LMX1AQ8TE12 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.97□□□□□ -2.25
LMX1AQ8TE12 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.97□□□□□ -2.25
LMX1AQ8TE12 AC092436.3-201ENST00000511788 257 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 RAB11AP2-201ENST00000545905 639 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.97□□□□□ -2.25
LMX1AQ8TE12 AGGF1P4-201ENST00000568249 801 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 MIR3923-201ENST00000579521 83 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 MIR3941-201ENST00000582572 103 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 AC091805.2-201ENST00000603848 235 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 AC016727.2-201ENST00000603988 621 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 AC009161.2-201ENST00000624626 138 ntBASIC0.97□□□□□ -2.25
LMX1AQ8TE12 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.97□□□□□ -2.25
LMX1AQ8TE12 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
LMX1AQ8TE12 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.96□□□□□ -2.26
LMX1AQ8TE12 RNU6-181P-201ENST00000363225 107 ntBASIC0.96□□□□□ -2.26
LMX1AQ8TE12 MIR618-201ENST00000385287 98 ntBASIC0.96□□□□□ -2.26
LMX1AQ8TE12 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.96□□□□□ -2.26
LMX1AQ8TE12 AL590135.1-201ENST00000422215 156 ntBASIC0.96□□□□□ -2.26
LMX1AQ8TE12 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.96□□□□□ -2.26
LMX1AQ8TE12 AC019205.3-201ENST00000424573 156 ntBASIC0.96□□□□□ -2.26
LMX1AQ8TE12 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.96□□□□□ -2.26
LMX1AQ8TE12 UBE2V1P8-201ENST00000437166 265 ntBASIC0.96□□□□□ -2.26
LMX1AQ8TE12 MTND4LP16-201ENST00000440828 295 ntBASIC0.96□□□□□ -2.26
LMX1AQ8TE12 AC016700.2-201ENST00000446011 156 ntBASIC0.96□□□□□ -2.26
LMX1AQ8TE12 AC132479.1-201ENST00000449160 144 ntBASIC0.96□□□□□ -2.26
LMX1AQ8TE12 AC022364.2-201ENST00000457963 554 ntBASIC0.96□□□□□ -2.26
LMX1AQ8TE12 RPS29P15-201ENST00000458329 171 ntBASIC0.96□□□□□ -2.26
LMX1AQ8TE12 AC015911.1-201ENST00000495111 156 ntBASIC0.96□□□□□ -2.26
LMX1AQ8TE12 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.96□□□□□ -2.26
LMX1AQ8TE12 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.96□□□□□ -2.26
LMX1AQ8TE12 RNU6-445P-201ENST00000516949 107 ntBASIC0.96□□□□□ -2.26
LMX1AQ8TE12 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.96□□□□□ -2.26
LMX1AQ8TE12 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.96□□□□□ -2.26
LMX1AQ8TE12 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.96□□□□□ -2.26
LMX1AQ8TE12 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.96□□□□□ -2.26
LMX1AQ8TE12 AC110760.3-201ENST00000598794 467 ntBASIC0.96□□□□□ -2.26
LMX1AQ8TE12 AC078795.3-201ENST00000602913 472 ntBASIC0.96□□□□□ -2.26
LMX1AQ8TE12 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.96□□□□□ -2.26
LMX1AQ8TE12 RNU1-76P-201ENST00000362903 159 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 RNU6-414P-201ENST00000363705 104 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 RNU6-271P-201ENST00000363858 105 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 SNORD31B-201ENST00000364977 69 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 Y_RNA.354-201ENST00000365448 111 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 MT-TH-201ENST00000387441 69 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 RNU6-360P-201ENST00000390944 104 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 RNU2-29P-201ENST00000410423 189 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.95□□□□□ -2.26
LMX1AQ8TE12 MTCO3P41-201ENST00000414801 328 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC133104.1-201ENST00000429100 218 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC099677.2-201ENST00000436385 175 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AL356010.1-201ENST00000456364 102 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC016925.1-201ENST00000458303 298 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 SCARNA18-201ENST00000459004 134 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 RPL30P7-201ENST00000479312 323 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 RPL26P26-201ENST00000480251 434 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC008628.2-201ENST00000502605 298 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.95□□□□□ -2.26
LMX1AQ8TE12 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.95□□□□□ -2.26
LMX1AQ8TE12 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC105417.1-201ENST00000514691 285 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 SNORA18.6-201ENST00000516792 115 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC019176.1-201ENST00000518519 225 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC060788.1-201ENST00000521318 469 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 CBX3P8-201ENST00000532412 525 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 HSPE1P4-201ENST00000550617 308 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 EIF4A1P12-201ENST00000551910 141 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC109446.1-201ENST00000566172 220 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 MTATP6P3-201ENST00000581686 676 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AP001836.1-201ENST00000604675 523 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 RPL17P51-201ENST00000605218 238 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC211469.2-201ENST00000605461 205 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC002044.1-201ENST00000606707 158 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC009994.1-201ENST00000606889 253 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms