Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AC126177.8-201ENST00000618339 1015 ntBASIC0.72□□□□□ -2.29
RPS4Y2Q8TD47 AC012676.2-201ENST00000619258 186 ntBASIC0.72□□□□□ -2.29
RPS4Y2Q8TD47 MIR338-201ENST00000636369 67 ntBASIC0.72□□□□□ -2.29
RPS4Y2Q8TD47 AC007671.2-201ENST00000637344 619 ntBASIC0.72□□□□□ -2.29
RPS4Y2Q8TD47 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
RPS4Y2Q8TD47 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
RPS4Y2Q8TD47 RNU6-552P-201ENST00000362869 119 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 SNORA4.2-201ENST00000365313 147 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 Y_RNA.367-201ENST00000365544 101 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 RNU11-5P-201ENST00000391216 129 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 SSR1P2-201ENST00000415208 787 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 AC132479.1-201ENST00000449160 144 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 USP9YP12-201ENST00000450481 570 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 HSPE1P13-201ENST00000451143 297 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 RPS23P5-201ENST00000495419 428 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 AC008628.2-201ENST00000502605 298 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 AC011406.1-201ENST00000512440 370 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 LRRC34P2-201ENST00000514850 553 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 RNU6-1178P-201ENST00000516674 107 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 RNU6-567P-201ENST00000516746 107 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 RN7SKP88-201ENST00000516847 250 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 RNU2-46P-201ENST00000517038 113 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 CBX3P8-201ENST00000532412 525 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 MTND1P8-201ENST00000571424 950 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 MTCO2P2-201ENST00000591258 225 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 AC013244.2-201ENST00000603396 103 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 AL078603.1-201ENST00000603824 313 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 Z99289.3-201ENST00000605586 594 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 7SK.8-201ENST00000612110 250 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 7SK.11-201ENST00000615477 250 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 7SK.13-201ENST00000622040 250 ntBASIC0.71□□□□□ -2.3
RPS4Y2Q8TD47 Y_RNA.132-201ENST00000363421 102 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 RNU6-877P-201ENST00000383868 107 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 RNU6-1026P-201ENST00000384465 108 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 RPL21P1-201ENST00000399532 476 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 AL356776.1-201ENST00000406574 447 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 HMGN1P14-201ENST00000412459 517 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 PRPS1P1-201ENST00000445305 876 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 MTCYBP1-201ENST00000454315 1119 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 MTCO3P7-201ENST00000510008 774 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 AC091874.1-201ENST00000511402 339 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 FABP5P5-201ENST00000515537 406 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 RNA5SP503-201ENST00000517047 117 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 CYCSP23-201ENST00000519781 313 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 AC090517.1-201ENST00000569307 266 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 AL022345.2-201ENST00000606307 135 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 AL020996.3-201ENST00000606617 222 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 AC064807.4-201ENST00000607201 407 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 SNORA43.4-201ENST00000629559 138 ntBASIC0.7□□□□□ -2.3
RPS4Y2Q8TD47 BX322639.1-202ENST00000423987 2213 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 RNU6-1123P-201ENST00000362347 106 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 RNU6-1287P-201ENST00000362914 107 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 RNU6-1060P-201ENST00000384664 107 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 MIR520E-201ENST00000384867 87 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 MIR515-2-201ENST00000384883 83 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 MIR515-1-201ENST00000384884 83 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 COX6CP10-201ENST00000416832 224 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 USP9YP28-201ENST00000435142 589 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 EPS15P1-201ENST00000448836 336 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 C1DP4-201ENST00000455429 424 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 SNRPFP3-201ENST00000457792 225 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 AL163973.1-201ENST00000484753 577 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 SNORD27.1-201ENST00000516319 72 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 RNU2-34P-201ENST00000516534 121 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 RNU6-165P-201ENST00000517170 99 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 SNORA25.17-201ENST00000517184 124 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 TMF1P1-201ENST00000576058 373 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 MIR4709-201ENST00000577272 72 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 MIR4775-201ENST00000581168 75 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 AC091805.2-201ENST00000603848 235 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 TUSC7.1-201ENST00000610969 165 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 AC108706.1-201ENST00000611053 297 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 AC040896.1-201ENST00000613819 479 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 AL136221.1-201ENST00000621449 509 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 AC022418.1-201ENST00000624118 445 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 MIR6767-201ENST00000637302 66 ntBASIC0.69□□□□□ -2.3
RPS4Y2Q8TD47 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.68□□□□□ -2.3
RPS4Y2Q8TD47 RNU6-562P-201ENST00000362731 107 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms