Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AL445984.1-201ENST00000637834 659 ntBASIC0.57□□□□□ -2.32
ZNF439Q8NDP4 AC068700.1-201ENST00000565862 3754 ntBASIC0.57□□□□□ -2.32
ZNF439Q8NDP4 RNU6-428P-201ENST00000362942 107 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 Y_RNA.191-201ENST00000363972 113 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 RNU6-501P-201ENST00000364072 100 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 RNU6-1303P-201ENST00000364841 107 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 SNORD115-7-201ENST00000365306 82 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 RNA5SP259-201ENST00000365541 109 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 AL606662.1-201ENST00000445763 553 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 PDCD5P2-201ENST00000507570 312 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 AC011406.1-201ENST00000512440 370 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 RNA5SP384-201ENST00000516615 116 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 TMF1P1-201ENST00000576058 373 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 FAM106DP-201ENST00000586416 501 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 AC078795.3-201ENST00000602913 472 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 Z99289.3-201ENST00000605586 594 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 AC126177.8-201ENST00000618339 1015 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 AL136221.1-201ENST00000621449 509 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 AC009878.1-201ENST00000621819 340 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 MTND5P17-201ENST00000418405 1603 ntBASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
ZNF439Q8NDP4 RNU6-552P-201ENST00000362869 119 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 RNU5F-6P-201ENST00000362979 116 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 SNORA33-201ENST00000363664 130 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 Y_RNA.164-201ENST00000363709 102 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 RNU6-534P-201ENST00000364877 106 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 RNU6-877P-201ENST00000383868 107 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 RNU6-116P-201ENST00000384042 109 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 RNU6-378P-201ENST00000384324 107 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 MIR300-201ENST00000401138 83 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 AC060773.1-201ENST00000421698 310 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 MTCO2P23-201ENST00000425216 680 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 SNAP23P1-201ENST00000433229 246 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 RNU7-34P-201ENST00000459394 64 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 SNORD124-201ENST00000459577 104 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 AC117454.1-201ENST00000491120 168 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 RN7SKP49-201ENST00000516675 260 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 AC022616.3-201ENST00000523940 148 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 MTND4P33-201ENST00000556706 766 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 Z98751.3-201ENST00000604447 521 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 AC009994.1-201ENST00000606889 253 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 AC064807.4-201ENST00000607201 407 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 MIR6835-201ENST00000621552 64 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 MIR338-201ENST00000636369 67 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 AL450472.1-202ENST00000637286 180 ntBASIC0.55□□□□□ -2.32
ZNF439Q8NDP4 SNORD114-24-201ENST00000365029 72 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 SNORD114-22-201ENST00000365423 72 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AL365184.2-201ENST00000431139 435 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 USP9YP28-201ENST00000435142 589 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 TAF9P1-201ENST00000445421 515 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AL133217.1-201ENST00000450980 425 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 TAF9P2-201ENST00000454958 515 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 SNRPFP3-201ENST00000457792 225 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 RPL39P38-201ENST00000467018 153 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 RAP1BP2-201ENST00000478270 544 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AL163973.1-201ENST00000484753 577 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AC079140.5-201ENST00000507882 310 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 Y_RNA.672-201ENST00000516289 104 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 SCARNA24.1-201ENST00000516465 137 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 RNA5SP168-201ENST00000516642 112 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AC004817.2-201ENST00000561794 651 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AC090517.1-201ENST00000569307 266 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AC008751.2-201ENST00000597885 980 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AC091805.2-201ENST00000603848 235 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AC064872.1-201ENST00000604823 1072 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AC027807.2-201ENST00000616099 408 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AC009159.2-201ENST00000617603 606 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AC010608.3-201ENST00000625048 527 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AC006927.3-201ENST00000638789 384 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 AC099654.13-201ENST00000639774 207 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 BX322639.1-202ENST00000423987 2213 ntBASIC0.54□□□□□ -2.32
ZNF439Q8NDP4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
ZNF439Q8NDP4 RNU6-562P-201ENST00000362731 107 ntBASIC0.53□□□□□ -2.32
ZNF439Q8NDP4 SNORD113-6-201ENST00000363345 75 ntBASIC0.53□□□□□ -2.32
ZNF439Q8NDP4 RNU6-169P-201ENST00000365336 107 ntBASIC0.53□□□□□ -2.32
ZNF439Q8NDP4 RNU6-950P-201ENST00000384651 107 ntBASIC0.53□□□□□ -2.32
ZNF439Q8NDP4 MIR520E-201ENST00000384867 87 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms