Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 SNORA64-201ENST00000384674 134 ntBASIC2.03□□□□□ -2.08
CCDC89Q8N998 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CCDC89Q8N998 AL023284.1-201ENST00000403956 276 ntBASIC2.03□□□□□ -2.08
CCDC89Q8N998 RPL21P111-201ENST00000418453 477 ntBASIC2.03□□□□□ -2.08
CCDC89Q8N998 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC89Q8N998 MTND2P22-201ENST00000444325 1033 ntBASIC2.03□□□□□ -2.08
CCDC89Q8N998 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC89Q8N998 AC087477.1-201ENST00000465747 340 ntBASIC2.03□□□□□ -2.08
CCDC89Q8N998 AC083904.1-201ENST00000487828 231 ntBASIC2.03□□□□□ -2.08
CCDC89Q8N998 RN7SL274P-201ENST00000492268 272 ntBASIC2.03□□□□□ -2.08
CCDC89Q8N998 FAM206BP-201ENST00000510179 541 ntBASIC2.03□□□□□ -2.08
CCDC89Q8N998 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC89Q8N998 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC89Q8N998 HMGB1P33-201ENST00000563485 527 ntBASIC2.03□□□□□ -2.08
CCDC89Q8N998 MIR5089-201ENST00000580047 84 ntBASIC2.03□□□□□ -2.08
CCDC89Q8N998 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC89Q8N998 MIR219B-201ENST00000637023 88 ntBASIC2.03□□□□□ -2.08
CCDC89Q8N998 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.02□□□□□ -2.09
CCDC89Q8N998 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC89Q8N998 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC89Q8N998 RNU6-877P-201ENST00000383868 107 ntBASIC2.02□□□□□ -2.09
CCDC89Q8N998 RNU4-26P-201ENST00000410270 107 ntBASIC2.02□□□□□ -2.09
CCDC89Q8N998 EBAG9P1-201ENST00000418955 543 ntBASIC2.02□□□□□ -2.09
CCDC89Q8N998 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.02□□□□□ -2.09
CCDC89Q8N998 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC89Q8N998 HMGN1P13-201ENST00000505795 138 ntBASIC2.02□□□□□ -2.09
CCDC89Q8N998 AC025465.3-201ENST00000510570 311 ntBASIC2.02□□□□□ -2.09
CCDC89Q8N998 AC067942.3-201ENST00000512025 362 ntBASIC2.02□□□□□ -2.09
CCDC89Q8N998 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.02□□□□□ -2.09
CCDC89Q8N998 RNU2-34P-201ENST00000516534 121 ntBASIC2.02□□□□□ -2.09
CCDC89Q8N998 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC89Q8N998 MRPS36P4-201ENST00000534436 298 ntBASIC2.02□□□□□ -2.09
CCDC89Q8N998 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC89Q8N998 MIR1273D-201ENST00000577266 86 ntBASIC2.02□□□□□ -2.09
CCDC89Q8N998 MIR4753-201ENST00000585119 83 ntBASIC2.02□□□□□ -2.09
CCDC89Q8N998 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC89Q8N998 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC89Q8N998 FAM157A-202ENST00000615155 405 ntBASIC2.02□□□□□ -2.09
CCDC89Q8N998 AC137590.2-201ENST00000619709 240 ntBASIC2.02□□□□□ -2.09
CCDC89Q8N998 AC048344.4-201ENST00000619744 527 ntBASIC2.02□□□□□ -2.09
CCDC89Q8N998 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC89Q8N998 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC89Q8N998 MIR424-201ENST00000362227 98 ntBASIC2.01□□□□□ -2.09
CCDC89Q8N998 RNU6-483P-201ENST00000384088 108 ntBASIC2.01□□□□□ -2.09
CCDC89Q8N998 RNU6-784P-201ENST00000384330 106 ntBASIC2.01□□□□□ -2.09
CCDC89Q8N998 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CCDC89Q8N998 MIR1283-1-201ENST00000408494 87 ntBASIC2.01□□□□□ -2.09
CCDC89Q8N998 MTCO1P20-201ENST00000425366 358 ntBASIC2.01□□□□□ -2.09
CCDC89Q8N998 NDUFA5P4-201ENST00000436704 385 ntBASIC2.01□□□□□ -2.09
CCDC89Q8N998 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC89Q8N998 AC004386.2-201ENST00000441858 148 ntBASIC2.01□□□□□ -2.09
CCDC89Q8N998 AL353705.4-201ENST00000449661 238 ntBASIC2.01□□□□□ -2.09
CCDC89Q8N998 DEFB131C-201ENST00000528817 165 ntBASIC2.01□□□□□ -2.09
CCDC89Q8N998 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC89Q8N998 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC89Q8N998 MIR4285-201ENST00000581001 85 ntBASIC2.01□□□□□ -2.09
CCDC89Q8N998 MIR5006-201ENST00000583027 110 ntBASIC2.01□□□□□ -2.09
CCDC89Q8N998 AC016727.2-201ENST00000603988 621 ntBASIC2.01□□□□□ -2.09
CCDC89Q8N998 AP000907.4-201ENST00000604143 237 ntBASIC2.01□□□□□ -2.09
CCDC89Q8N998 AC069114.2-201ENST00000604699 304 ntBASIC2.01□□□□□ -2.09
CCDC89Q8N998 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC89Q8N998 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC89Q8N998 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC89Q8N998 SCARNA15.3-201ENST00000626315 122 ntBASIC2.01□□□□□ -2.09
CCDC89Q8N998 SCARNA4.1-201ENST00000628597 123 ntBASIC2.01□□□□□ -2.09
CCDC89Q8N998 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.01□□□□□ -2.09
CCDC89Q8N998 RNU6-254P-201ENST00000363377 107 ntBASIC2□□□□□ -2.09
CCDC89Q8N998 Y_RNA.194-201ENST00000363985 102 ntBASIC2□□□□□ -2.09
CCDC89Q8N998 RNU6-296P-201ENST00000384608 107 ntBASIC2□□□□□ -2.09
CCDC89Q8N998 MIR520A-201ENST00000384862 85 ntBASIC2□□□□□ -2.09
CCDC89Q8N998 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2□□□□□ -2.09
CCDC89Q8N998 AL645568.3-201ENST00000433683 316 ntBASIC2□□□□□ -2.09
CCDC89Q8N998 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2□□□□□ -2.09
CCDC89Q8N998 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2□□□□□ -2.09
CCDC89Q8N998 HMGB1P18-201ENST00000438801 619 ntBASIC2□□□□□ -2.09
CCDC89Q8N998 AC096638.1-201ENST00000444678 216 ntBASIC2□□□□□ -2.09
CCDC89Q8N998 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2□□□□□ -2.09
CCDC89Q8N998 OR2AQ1P-201ENST00000451972 200 ntBASIC2□□□□□ -2.09
CCDC89Q8N998 Y_RNA.704-201ENST00000516851 102 ntBASIC2□□□□□ -2.09
CCDC89Q8N998 RNU6-856P-201ENST00000516959 98 ntBASIC2□□□□□ -2.09
CCDC89Q8N998 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2□□□□□ -2.09
CCDC89Q8N998 AC010525.2-201ENST00000590920 195 ntBASIC2□□□□□ -2.09
CCDC89Q8N998 SNRPGP20-201ENST00000604477 205 ntBASIC2□□□□□ -2.09
CCDC89Q8N998 AC016925.2-201ENST00000605108 242 ntBASIC2□□□□□ -2.09
CCDC89Q8N998 RMST_3.1-201ENST00000611651 109 ntBASIC2□□□□□ -2.09
CCDC89Q8N998 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2□□□□□ -2.09
CCDC89Q8N998 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
CCDC89Q8N998 RNU6-862P-201ENST00000362804 105 ntBASIC1.99□□□□□ -2.09
CCDC89Q8N998 RNU6-414P-201ENST00000363705 104 ntBASIC1.99□□□□□ -2.09
CCDC89Q8N998 Y_RNA.373-201ENST00000365600 103 ntBASIC1.99□□□□□ -2.09
CCDC89Q8N998 RNU6-418P-201ENST00000384035 107 ntBASIC1.99□□□□□ -2.09
CCDC89Q8N998 RNU6-439P-201ENST00000384188 106 ntBASIC1.99□□□□□ -2.09
CCDC89Q8N998 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CCDC89Q8N998 MIR320B2-201ENST00000408479 138 ntBASIC1.99□□□□□ -2.09
CCDC89Q8N998 RNA5SP425-201ENST00000410336 112 ntBASIC1.99□□□□□ -2.09
CCDC89Q8N998 UBE2V1P8-201ENST00000437166 265 ntBASIC1.99□□□□□ -2.09
CCDC89Q8N998 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC89Q8N998 AL513124.1-201ENST00000450410 614 ntBASIC1.99□□□□□ -2.09
CCDC89Q8N998 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC89Q8N998 AC007215.1-201ENST00000464893 276 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms