Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC025033.1-201ENST00000463883 194 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 AC096745.1-201ENST00000509945 370 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 RNU6-277P-201ENST00000516272 106 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 HSPE1P18-201ENST00000517602 280 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 AC105029.1-201ENST00000520250 669 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 TRAV32-201ENST00000553993 340 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.08□□□□□ -2.08
RTL3Q8N8U3 FGF7P1-201ENST00000582820 288 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 BNIP3P16-201ENST00000589779 534 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 AL132765.2-201ENST00000610812 351 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 U2.15-201ENST00000611544 191 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 U2.16-201ENST00000613119 191 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 U2.12-201ENST00000613778 191 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 U2.20-201ENST00000613956 192 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 U2.9-201ENST00000615427 191 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 AC063943.3-201ENST00000615562 356 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 U2.11-201ENST00000616345 191 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 U2.2-201ENST00000616535 191 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 U2.3-201ENST00000617785 191 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 U2.19-201ENST00000618602 191 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 RNU2-1-201ENST00000618664 191 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 U2.6-201ENST00000619225 191 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 U2.5-201ENST00000619465 191 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 U2.10-201ENST00000620268 191 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
RTL3Q8N8U3 MTND4P1-201ENST00000457501 1466 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 BTF3L4P2-201ENST00000392798 346 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 AL079342.1-201ENST00000401460 267 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 Y_RNA.597-201ENST00000410463 100 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 RNU2-48P-201ENST00000410694 191 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 AL030996.1-201ENST00000411430 235 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 AC027124.2-201ENST00000428249 105 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RTL3Q8N8U3 AL353689.1-201ENST00000438895 199 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.07□□□□□ -2.08
RTL3Q8N8U3 RPL23AP7-203ENST00000449021 469 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 PRELID3BP1-201ENST00000457142 540 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 RNU7-187P-201ENST00000458985 68 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 RNU6-1037P-201ENST00000459571 107 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 AC130509.1-201ENST00000464158 433 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 Y_RNA.682-201ENST00000516457 100 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 AC104576.1-201ENST00000524225 88 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 RAB11AP2-201ENST00000545905 639 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 AC103996.1-201ENST00000555468 102 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 POLR3GP2-201ENST00000588366 668 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 AC243960.4-201ENST00000600532 288 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 AL133215.3-201ENST00000609801 448 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 AL627230.6-201ENST00000611129 280 ntBASIC2.07□□□□□ -2.08
RTL3Q8N8U3 AL359851.1-201ENST00000569460 4997 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
RTL3Q8N8U3 RNU6-743P-201ENST00000364151 106 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 RNU4-52P-201ENST00000384209 138 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 SNORD14D-201ENST00000384390 87 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
RTL3Q8N8U3 AL139396.1-201ENST00000421137 167 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 CBX3P6-201ENST00000430257 527 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 AC243964.1-201ENST00000441814 261 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 AL031274.1-201ENST00000450334 232 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.06□□□□□ -2.08
RTL3Q8N8U3 RN7SL429P-201ENST00000479090 223 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 RN7SL489P-201ENST00000486185 223 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 RN7SL327P-201ENST00000488659 223 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 PTP4A1P4-201ENST00000512479 322 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.06□□□□□ -2.08
RTL3Q8N8U3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.06□□□□□ -2.08
RTL3Q8N8U3 AC005668.1-201ENST00000571142 476 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 MIR4790-201ENST00000577799 79 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 MIR3945-201ENST00000581853 98 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.06□□□□□ -2.08
RTL3Q8N8U3 AL132822.1-201ENST00000617063 513 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 RN7SL853P-201ENST00000617250 223 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 AC098657.3-201ENST00000620434 263 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 ZNF355P-201ENST00000427301 3216 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 MTND4P23-201ENST00000447723 1363 ntBASIC2.06□□□□□ -2.08
RTL3Q8N8U3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.06□□□□□ -2.08
RTL3Q8N8U3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RTL3Q8N8U3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RTL3Q8N8U3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RTL3Q8N8U3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RTL3Q8N8U3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RTL3Q8N8U3 Y_RNA.529-201ENST00000384586 119 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 RNA5SP465-201ENST00000391195 109 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RTL3Q8N8U3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 MIR548F5-201ENST00000408421 86 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 SRIP3-201ENST00000413200 219 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 AL158823.1-201ENST00000418441 478 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.05□□□□□ -2.08
RTL3Q8N8U3 WARS2P1-201ENST00000429678 537 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 RPS3AP52-201ENST00000435639 297 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.05□□□□□ -2.08
RTL3Q8N8U3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RTL3Q8N8U3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.05□□□□□ -2.08
RTL3Q8N8U3 RPL23AP6-201ENST00000446637 472 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 RNU6-717P-201ENST00000459076 104 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 RPS29P27-201ENST00000463711 170 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 AC090255.1-201ENST00000495779 349 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 RNU6-273P-201ENST00000516937 96 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 MIR5089-201ENST00000580047 84 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms