Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 SCARNA4-201ENST00000629045 128 ntBASIC2.4□□□□□ -2.03
PCDH20Q8N6Y1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PCDH20Q8N6Y1 AC073544.1-201ENST00000600110 1595 ntBASIC2.4□□□□□ -2.03
PCDH20Q8N6Y1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PCDH20Q8N6Y1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 Y_RNA.187-201ENST00000363918 113 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 RNU6-595P-201ENST00000363944 107 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 RNU4-56P-201ENST00000364700 142 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 Y_RNA.419-201ENST00000384041 102 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 RNU6-301P-201ENST00000384277 107 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 RNU6-443P-201ENST00000384780 107 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 AL358453.1-201ENST00000422522 250 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 RPL23AP50-201ENST00000434149 455 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 AL445687.1-201ENST00000439946 251 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 AF186996.7-201ENST00000492781 209 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 AC021146.2-201ENST00000504736 556 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 AC008413.1-201ENST00000511864 177 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 RNU6-567P-201ENST00000516746 107 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 SNORD53-201ENST00000579969 78 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 MIR4658-201ENST00000584344 65 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 AL078605.1-201ENST00000603529 500 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 AL356280.1-201ENST00000603614 379 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 Z98751.3-201ENST00000604447 521 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 MTND5P10-201ENST00000603719 1809 ntBASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
PCDH20Q8N6Y1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 Y_RNA.146-201ENST00000363549 102 ntBASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 RNU4-9P-201ENST00000364951 139 ntBASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 RNU6-220P-201ENST00000390919 107 ntBASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 Y_RNA.579-201ENST00000390939 94 ntBASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 AL353997.1-201ENST00000432936 108 ntBASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 AL353752.1-201ENST00000454946 260 ntBASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 RPL23AP75-201ENST00000491601 451 ntBASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 MIR5007-201ENST00000583098 95 ntBASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 AL713866.2-201ENST00000603579 219 ntBASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 AL670379.2-201ENST00000604983 252 ntBASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 AC064859.1-201ENST00000624741 174 ntBASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDH20Q8N6Y1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 MIR21-201ENST00000362134 72 ntBASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 snoU2_19.1-201ENST00000362361 80 ntBASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 RNY1P16-201ENST00000363063 111 ntBASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 RNU6-1040P-201ENST00000383974 107 ntBASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 RNA5SP494-201ENST00000410653 129 ntBASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 AC007064.1-201ENST00000412238 351 ntBASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 Z82209.1-201ENST00000422141 2135 ntBASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 AC012306.1-201ENST00000423267 114 ntBASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 RNU7-26P-201ENST00000458980 63 ntBASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 AC093303.1-201ENST00000514549 295 ntBASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 AL590705.4-201ENST00000532209 134 ntBASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 AC091544.4-201ENST00000555268 342 ntBASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 MIR5701-3-201ENST00000578890 82 ntBASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 MIR5701-1-201ENST00000585138 82 ntBASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 AC080078.3-201ENST00000605407 463 ntBASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 MIR5701-2-201ENST00000615634 82 ntBASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
PCDH20Q8N6Y1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 AC080100.1-201ENST00000624239 5356 ntBASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 MIR144-201ENST00000384886 86 ntBASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 AL135786.1-201ENST00000415892 214 ntBASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 Z82188.1-201ENST00000436709 154 ntBASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 UBE2V1P7-201ENST00000446395 340 ntBASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 RN7SKP210-201ENST00000459176 261 ntBASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 AC087477.1-201ENST00000465747 340 ntBASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 RPL30P10-201ENST00000488148 337 ntBASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 RPL17P19-201ENST00000489069 552 ntBASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 AC022493.2-201ENST00000506122 481 ntBASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 RNU6-1170P-201ENST00000515974 106 ntBASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 RNA5SP281-201ENST00000516504 135 ntBASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 CYP4A27P-201ENST00000567218 190 ntBASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 7SK.7-201ENST00000603504 247 ntBASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 MIR6895-201ENST00000613497 78 ntBASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDH20Q8N6Y1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDH20Q8N6Y1 RNU4-15P-201ENST00000362613 141 ntBASIC2.35□□□□□ -2.03
PCDH20Q8N6Y1 SNORD115-32-201ENST00000364079 82 ntBASIC2.35□□□□□ -2.03
PCDH20Q8N6Y1 MIR29B2-201ENST00000385055 81 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms