Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AL590556.1-201ENST00000423231 483 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.24□□□□□ -2.05
CPSF7Q8N684 AL161788.1-201ENST00000441805 169 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.24□□□□□ -2.05
CPSF7Q8N684 RNU7-26P-201ENST00000458980 63 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 FO393415.2-201ENST00000480085 343 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 AC234781.5-201ENST00000508429 271 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.24□□□□□ -2.05
CPSF7Q8N684 RNU6-567P-201ENST00000516746 107 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 Y_RNA.708-201ENST00000516950 96 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 IGKV3-31-201ENST00000523109 329 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.24□□□□□ -2.05
CPSF7Q8N684 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CPSF7Q8N684 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.24□□□□□ -2.05
CPSF7Q8N684 AC016256.1-201ENST00000547971 354 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 MIR4769-201ENST00000584126 77 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 AC011494.1-201ENST00000596454 237 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 AL158827.2-201ENST00000602494 330 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 AL078605.1-201ENST00000603529 500 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 Z98751.3-201ENST00000604447 521 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 PISRT1.1-201ENST00000616930 107 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 AL691447.3-201ENST00000635020 330 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CPSF7Q8N684 AC233981.2-201ENST00000611524 1614 ntBASIC2.24□□□□□ -2.05
CPSF7Q8N684 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.24□□□□□ -2.05
CPSF7Q8N684 AL596028.1-201ENST00000326971 197 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 SNORA29-201ENST00000384183 140 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 MIR29B2-201ENST00000385055 81 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 RNU6-174P-201ENST00000410406 106 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 RNU6-370P-201ENST00000411008 104 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 IPO7P1-201ENST00000442031 636 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 AL353705.4-201ENST00000449661 238 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 AC079354.2-201ENST00000453523 154 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 RPS29P21-201ENST00000496272 170 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 AC021146.2-201ENST00000504736 556 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 FGF7P4-201ENST00000509595 295 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 RNU6-559P-201ENST00000516151 98 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 Y_RNA.670-201ENST00000516255 105 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 RNU6-277P-201ENST00000516272 106 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 MIR3923-201ENST00000579521 83 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.23□□□□□ -2.05
CPSF7Q8N684 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.23□□□□□ -2.05
CPSF7Q8N684 AL355297.2-201ENST00000604792 129 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 AC009229.3-201ENST00000608056 282 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 AC009318.2-201ENST00000610917 651 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 HMGB1P24-202ENST00000615653 685 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 MIR6766-201ENST00000622641 72 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 MTND5P9-201ENST00000503854 1755 ntBASIC2.23□□□□□ -2.05
CPSF7Q8N684 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
CPSF7Q8N684 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.23□□□□□ -2.05
CPSF7Q8N684 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CPSF7Q8N684 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.22□□□□□ -2.05
CPSF7Q8N684 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CPSF7Q8N684 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.22□□□□□ -2.05
CPSF7Q8N684 Y_RNA.2-201ENST00000362330 96 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 RNU4-15P-201ENST00000362613 141 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 Y_RNA.384-201ENST00000383909 102 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 RNU6-1274P-201ENST00000384557 107 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 RNU6-1072P-201ENST00000384703 107 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 RNU6-443P-201ENST00000384780 107 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 RNA5SP494-201ENST00000410653 129 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 Z98742.3-201ENST00000418637 326 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 AC012306.1-201ENST00000423267 114 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 RPS15AP28-201ENST00000435088 386 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 SNRPEP8-201ENST00000442866 260 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 RPL7P42-201ENST00000481005 679 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 AC145146.1-201ENST00000496370 254 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 AC005741.1-201ENST00000511094 432 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.22□□□□□ -2.05
CPSF7Q8N684 AC021269.2-201ENST00000532318 330 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 CBX3P7-201ENST00000532876 502 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.22□□□□□ -2.05
CPSF7Q8N684 MIR5007-201ENST00000583098 95 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 MIR4448-201ENST00000584360 86 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 LARP7P1-201ENST00000605576 316 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 AP000654.2-201ENST00000605633 586 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 AC103810.6-201ENST00000606708 136 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 AC112487.2-201ENST00000637950 304 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 KPNA2P1-201ENST00000458289 1591 ntBASIC2.22□□□□□ -2.05
CPSF7Q8N684 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CPSF7Q8N684 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
CPSF7Q8N684 Y_RNA.387-201ENST00000383918 102 ntBASIC2.21□□□□□ -2.06
CPSF7Q8N684 SNORA75.4-201ENST00000391278 119 ntBASIC2.21□□□□□ -2.06
CPSF7Q8N684 AL356320.1-201ENST00000429616 163 ntBASIC2.21□□□□□ -2.06
CPSF7Q8N684 AC018634.1-201ENST00000437554 401 ntBASIC2.21□□□□□ -2.06
CPSF7Q8N684 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.21□□□□□ -2.06
CPSF7Q8N684 snoU13.6-201ENST00000458785 104 ntBASIC2.21□□□□□ -2.06
CPSF7Q8N684 Y_RNA.638-201ENST00000459374 113 ntBASIC2.21□□□□□ -2.06
CPSF7Q8N684 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.21□□□□□ -2.06
CPSF7Q8N684 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.21□□□□□ -2.06
CPSF7Q8N684 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.21□□□□□ -2.06
CPSF7Q8N684 CYP4A27P-201ENST00000567218 190 ntBASIC2.21□□□□□ -2.06
CPSF7Q8N684 AL355375.2-201ENST00000574825 175 ntBASIC2.21□□□□□ -2.06
CPSF7Q8N684 MIR4648-201ENST00000580107 72 ntBASIC2.21□□□□□ -2.06
CPSF7Q8N684 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CPSF7Q8N684 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CPSF7Q8N684 RNU5B-2P-201ENST00000363036 113 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms