Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 MIR5571-201ENST00000577998 113 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 AC073476.4-201ENST00000628409 72 ntBASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SLC44A3Q8N4M1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 RNU6-1266P-201ENST00000362794 105 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 SNORD56.3-201ENST00000363507 71 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 SNORD63-201ENST00000384262 68 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 MIR32-201ENST00000384965 70 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 MIR153-2-201ENST00000385225 87 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 RNA5SP508-201ENST00000411327 119 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 AC074117.2-201ENST00000417130 397 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 MTND5P15-201ENST00000434246 349 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 AC096638.1-201ENST00000444678 216 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 EEF1B2P7-201ENST00000451177 676 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 RPL26P26-201ENST00000480251 434 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 MRPL42P6-201ENST00000486397 371 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 RNU4-71P-201ENST00000516258 113 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 SNORA31.23-201ENST00000517219 133 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 AC026470.2-201ENST00000561492 181 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 MIR4643-201ENST00000577473 78 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 MIR4423-201ENST00000580922 80 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 AL356157.2-201ENST00000605122 111 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 U2.14-201ENST00000615943 113 ntBASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SLC44A3Q8N4M1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 AC110774.1-201ENST00000623567 2018 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 MIR148B-201ENST00000362252 99 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 RNA5SP361-201ENST00000362686 118 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 SNORD113-8-201ENST00000363497 74 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 Y_RNA.277-201ENST00000364754 102 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 RNU6-1035P-201ENST00000384477 107 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 MIR10B-201ENST00000385011 110 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 RNU1-101P-201ENST00000391171 127 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 RPS4XP3-201ENST00000398541 413 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 PIGPP3-201ENST00000425307 415 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 AC005002.2-201ENST00000438228 269 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 RPS15AP7-201ENST00000439294 405 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 AC016700.2-201ENST00000446011 156 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 AP001025.1-201ENST00000486139 332 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 AC006483.1-201ENST00000487308 313 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 RPS29P20-201ENST00000489592 171 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 SNORA81.3-201ENST00000517283 198 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 AC107016.2-201ENST00000547968 190 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 AC091544.4-201ENST00000555268 342 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 BX284668.6-201ENST00000606899 438 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 AC024581.2-201ENST00000619986 252 ntBASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.04□□□□□ -1.92
SLC44A3Q8N4M1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 AC096644.4-201ENST00000563417 2912 ntBASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 AC073325.2-201ENST00000339545 159 ntBASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 SNORD56.1-201ENST00000362913 68 ntBASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 RNU6-280P-201ENST00000364145 104 ntBASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 Y_RNA.269-201ENST00000364685 89 ntBASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 RNU6-290P-201ENST00000365212 101 ntBASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 MIR196B-201ENST00000384852 84 ntBASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 MIR487A-201ENST00000385009 80 ntBASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 Y_RNA.602-201ENST00000410535 92 ntBASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 RNU4-61P-201ENST00000411243 107 ntBASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 TRBV12-1-201ENST00000479785 344 ntBASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 RNU6-182P-201ENST00000516970 105 ntBASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 RRN3P3-201ENST00000549207 578 ntBASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 AC079600.2-201ENST00000550076 130 ntBASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 AL391261.3-201ENST00000557194 520 ntBASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 AC019159.1-201ENST00000605094 187 ntBASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SLC44A3Q8N4M1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.02□□□□□ -1.93
SLC44A3Q8N4M1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.02□□□□□ -1.93
SLC44A3Q8N4M1 SNORD115-8-201ENST00000363856 82 ntBASIC3.02□□□□□ -1.93
SLC44A3Q8N4M1 Y_RNA.180-201ENST00000363867 113 ntBASIC3.02□□□□□ -1.93
SLC44A3Q8N4M1 SNORD115-38-201ENST00000365037 82 ntBASIC3.02□□□□□ -1.93
SLC44A3Q8N4M1 SNORA26.3-201ENST00000391119 136 ntBASIC3.02□□□□□ -1.93
SLC44A3Q8N4M1 RN7SKP61-201ENST00000410642 295 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms