Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
BEST3Q8N1M1 AL078595.1-201ENST00000404458 226 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 RNU2-63P-201ENST00000410792 194 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 RPS26P42-201ENST00000413485 326 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 AC009963.1-201ENST00000417265 157 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
BEST3Q8N1M1 AL161788.1-201ENST00000441805 169 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 snoU13.30-201ENST00000458951 104 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 AC145146.1-201ENST00000496370 254 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.34□□□□□ -2.03
BEST3Q8N1M1 AC008413.1-201ENST00000511864 177 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 RNU6-470P-201ENST00000515954 104 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 RNU6-1170P-201ENST00000515974 106 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 SNORA31.15-201ENST00000516771 132 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 AC104581.2-201ENST00000572227 430 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 MIR5701-3-201ENST00000578890 82 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 MIR5701-1-201ENST00000585138 82 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.34□□□□□ -2.03
BEST3Q8N1M1 MIR5701-2-201ENST00000615634 82 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 U4.3-201ENST00000621047 82 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 AL160413.1-201ENST00000622780 310 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 AC010297.1-201ENST00000623948 149 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 AC073544.1-201ENST00000600110 1595 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
BEST3Q8N1M1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.33□□□□□ -2.04
BEST3Q8N1M1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
BEST3Q8N1M1 MIR6073-201ENST00000352083 89 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 RNU6-1040P-201ENST00000383974 107 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 SNORA67.4-201ENST00000384688 142 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 MIR95-201ENST00000385072 81 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 Y_RNA.579-201ENST00000390939 94 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 RNA5SP210-201ENST00000391034 120 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 RNU6-700P-201ENST00000391043 107 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 RNA5SP181-201ENST00000410246 98 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 RNA5SP201-201ENST00000410316 124 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.33□□□□□ -2.04
BEST3Q8N1M1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.33□□□□□ -2.04
BEST3Q8N1M1 AC003685.2-201ENST00000422795 395 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 AL353997.1-201ENST00000432936 108 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.33□□□□□ -2.04
BEST3Q8N1M1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.33□□□□□ -2.04
BEST3Q8N1M1 OR2AQ1P-201ENST00000451972 200 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 AC022493.2-201ENST00000506122 481 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.33□□□□□ -2.04
BEST3Q8N1M1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.33□□□□□ -2.04
BEST3Q8N1M1 AC010928.2-201ENST00000588017 287 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 AL138963.2-201ENST00000605137 226 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 AC080078.3-201ENST00000605407 463 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 RMST_6.1-201ENST00000611980 203 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 PCGEM1.1-201ENST00000613431 131 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 CTSLP2-204ENST00000629029 392 ntBASIC2.33□□□□□ -2.04
BEST3Q8N1M1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
BEST3Q8N1M1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
BEST3Q8N1M1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
BEST3Q8N1M1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
BEST3Q8N1M1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
BEST3Q8N1M1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.33□□□□□ -2.04
BEST3Q8N1M1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.32□□□□□ -2.04
BEST3Q8N1M1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
BEST3Q8N1M1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.32□□□□□ -2.04
BEST3Q8N1M1 RNU6-490P-201ENST00000362985 107 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 U3.9-201ENST00000363823 204 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 Y_RNA.419-201ENST00000384041 102 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 RNU6-1032P-201ENST00000384100 107 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 MIR518C-201ENST00000384822 101 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 SNORA12.2-201ENST00000391040 156 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 MIR208B-201ENST00000401172 77 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 MTCYBP10-201ENST00000424905 650 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 Z82188.1-201ENST00000436709 154 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.32□□□□□ -2.04
BEST3Q8N1M1 AC104389.3-201ENST00000445629 235 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 snoU13.6-201ENST00000458785 104 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.32□□□□□ -2.04
BEST3Q8N1M1 RNU6-1198P-201ENST00000516904 67 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 AC109329.2-201ENST00000519658 482 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.32□□□□□ -2.04
BEST3Q8N1M1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.32□□□□□ -2.04
BEST3Q8N1M1 AC091544.4-201ENST00000555268 342 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 SUB1P3-201ENST00000564581 315 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 AC023824.2-201ENST00000566185 400 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.32□□□□□ -2.04
BEST3Q8N1M1 AC100812.1-201ENST00000607622 580 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.32□□□□□ -2.04
BEST3Q8N1M1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
BEST3Q8N1M1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.31□□□□□ -2.04
BEST3Q8N1M1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
BEST3Q8N1M1 Y_RNA.405-201ENST00000383979 100 ntBASIC2.31□□□□□ -2.04
BEST3Q8N1M1 Y_RNA.451-201ENST00000384200 100 ntBASIC2.31□□□□□ -2.04
BEST3Q8N1M1 RNU6-378P-201ENST00000384324 107 ntBASIC2.31□□□□□ -2.04
BEST3Q8N1M1 RNU6-1274P-201ENST00000384557 107 ntBASIC2.31□□□□□ -2.04
BEST3Q8N1M1 Y_RNA.524-201ENST00000384564 100 ntBASIC2.31□□□□□ -2.04
BEST3Q8N1M1 Y_RNA.561-201ENST00000384694 100 ntBASIC2.31□□□□□ -2.04
BEST3Q8N1M1 MIR32-201ENST00000384965 70 ntBASIC2.31□□□□□ -2.04
BEST3Q8N1M1 MIR153-2-201ENST00000385225 87 ntBASIC2.31□□□□□ -2.04
BEST3Q8N1M1 RNU6-1093P-201ENST00000391194 107 ntBASIC2.31□□□□□ -2.04
BEST3Q8N1M1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.31□□□□□ -2.04
BEST3Q8N1M1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.31□□□□□ -2.04
BEST3Q8N1M1 TRBV12-1-201ENST00000479785 344 ntBASIC2.31□□□□□ -2.04
BEST3Q8N1M1 AC027575.1-201ENST00000481064 460 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms