Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 Y_RNA.619-201ENST00000410951 90 ntBASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 AL590632.1-201ENST00000424289 371 ntBASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 PRELID3BP1-201ENST00000457142 540 ntBASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 RPS29P11-201ENST00000496507 171 ntBASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 AC021146.2-201ENST00000504736 556 ntBASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 MIR449C-201ENST00000516047 92 ntBASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-295P-201ENST00000516901 104 ntBASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 SNORA31.25-201ENST00000517242 134 ntBASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 AC016256.1-201ENST00000547971 354 ntBASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 AC109446.1-201ENST00000566172 220 ntBASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 AL133215.3-201ENST00000609801 448 ntBASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 MIR8076-201ENST00000611401 83 ntBASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 AC002553.4-201ENST00000616896 331 ntBASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-562P-201ENST00000362731 107 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-234P-201ENST00000365229 104 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 SNORA32.2-201ENST00000384049 122 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-378P-201ENST00000384324 107 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 Y_RNA.505-201ENST00000384489 102 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-95P-201ENST00000384697 107 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 SNORA40.18-201ENST00000391200 128 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-1148P-201ENST00000410992 104 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 AC012306.1-201ENST00000423267 114 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 MTND1P11-201ENST00000456661 876 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 AC107032.1-201ENST00000485945 480 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 AC116337.1-201ENST00000509680 687 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 RNU2-44P-201ENST00000516795 194 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 MIR3942-201ENST00000585264 109 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 AC023043.2-201ENST00000589678 1026 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 AP000654.2-201ENST00000605633 586 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 MIR3976-201ENST00000606807 139 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 PCGEM1.1-201ENST00000613431 131 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 AL136221.1-201ENST00000621449 509 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 AP006437.1-201ENST00000641440 3685 ntBASIC1.7□□□□□ -2.14
C9orf40Q8IXQ3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 SNORD115-3-201ENST00000363100 82 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 Y_RNA.135-201ENST00000363439 95 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 Y_RNA.151-201ENST00000363566 112 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 Y_RNA.212-201ENST00000364177 102 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-26P-201ENST00000383985 107 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-790P-201ENST00000384479 105 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 HMGN2P39-201ENST00000398005 273 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 MIR208B-201ENST00000401172 77 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 MIR1262-201ENST00000408276 93 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 PCMTD1P1-201ENST00000455560 355 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 AC132942.1-201ENST00000486753 483 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 RPL23AP63-201ENST00000498752 471 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 PTP4A1P4-201ENST00000512479 322 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-273P-201ENST00000516937 96 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 EIF4A1P12-201ENST00000551910 141 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 AC093913.1-201ENST00000614178 329 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 AC006504.8-201ENST00000621046 635 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.69□□□□□ -2.14
C9orf40Q8IXQ3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 SNORA16.1-201ENST00000364597 132 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 SNORD116-11-201ENST00000383882 92 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-968P-201ENST00000384076 107 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 SNORA29-201ENST00000384183 140 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 SNORA40.19-201ENST00000390846 128 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 Y_RNA.599-201ENST00000410489 109 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 SRIP3-201ENST00000413200 219 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 NFU1P2-201ENST00000448700 469 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 snoU13.6-201ENST00000458785 104 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms