Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 Y_RNA.441-201ENST00000384123 112 ntBASIC3.03□□□□□ -1.92
VRK3Q8IV63 SNORA54-201ENST00000384281 123 ntBASIC3.03□□□□□ -1.92
VRK3Q8IV63 RNU6-1289P-201ENST00000384431 106 ntBASIC3.03□□□□□ -1.92
VRK3Q8IV63 SNORD116-20-201ENST00000384529 92 ntBASIC3.03□□□□□ -1.92
VRK3Q8IV63 RPL32P35-201ENST00000415214 394 ntBASIC3.03□□□□□ -1.92
VRK3Q8IV63 TRIAP1P1-201ENST00000427062 225 ntBASIC3.03□□□□□ -1.92
VRK3Q8IV63 AC125238.1-201ENST00000448842 249 ntBASIC3.03□□□□□ -1.92
VRK3Q8IV63 AP001324.2-201ENST00000461163 319 ntBASIC3.03□□□□□ -1.92
VRK3Q8IV63 AC091021.1-201ENST00000468051 388 ntBASIC3.03□□□□□ -1.92
VRK3Q8IV63 Y_RNA.679-201ENST00000516416 91 ntBASIC3.03□□□□□ -1.92
VRK3Q8IV63 SNORA31.23-201ENST00000517219 133 ntBASIC3.03□□□□□ -1.92
VRK3Q8IV63 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.03□□□□□ -1.92
VRK3Q8IV63 RPL21P9-201ENST00000556149 474 ntBASIC3.03□□□□□ -1.92
VRK3Q8IV63 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.03□□□□□ -1.92
VRK3Q8IV63 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.03□□□□□ -1.92
VRK3Q8IV63 MIR5695-201ENST00000579717 85 ntBASIC3.03□□□□□ -1.92
VRK3Q8IV63 AC020895.1-201ENST00000595362 272 ntBASIC3.03□□□□□ -1.92
VRK3Q8IV63 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.03□□□□□ -1.92
VRK3Q8IV63 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.03□□□□□ -1.92
VRK3Q8IV63 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.03□□□□□ -1.93
VRK3Q8IV63 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VRK3Q8IV63 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VRK3Q8IV63 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.02□□□□□ -1.93
VRK3Q8IV63 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VRK3Q8IV63 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.02□□□□□ -1.93
VRK3Q8IV63 Y_RNA.217-201ENST00000364214 105 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 RNU6-1141P-201ENST00000364520 107 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 RNU6-1175P-201ENST00000365200 107 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 RNU6-541P-201ENST00000384709 110 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 SNORD15B-201ENST00000384714 146 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 MIR487A-201ENST00000385009 80 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 MIR607-201ENST00000385241 96 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 SNORA46.1-201ENST00000391069 153 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 NDUFB4P6-201ENST00000436819 366 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 AC007395.1-201ENST00000451333 677 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 Y_RNA.641-201ENST00000459414 105 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.02□□□□□ -1.93
VRK3Q8IV63 MTND5P41-201ENST00000517498 206 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.02□□□□□ -1.93
VRK3Q8IV63 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.02□□□□□ -1.93
VRK3Q8IV63 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.02□□□□□ -1.93
VRK3Q8IV63 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.02□□□□□ -1.93
VRK3Q8IV63 AC012493.2-201ENST00000595083 291 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.02□□□□□ -1.93
VRK3Q8IV63 AL138963.2-201ENST00000605137 226 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 AC022441.3-201ENST00000605737 136 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 AC004832.4-201ENST00000608952 331 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 AC073349.3-201ENST00000617616 186 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 AC048347.1-201ENST00000624621 427 ntBASIC3.02□□□□□ -1.93
VRK3Q8IV63 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.02□□□□□ -1.93
VRK3Q8IV63 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VRK3Q8IV63 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
VRK3Q8IV63 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.02□□□□□ -1.93
VRK3Q8IV63 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.02□□□□□ -1.93
VRK3Q8IV63 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.01□□□□□ -1.93
VRK3Q8IV63 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.01□□□□□ -1.93
VRK3Q8IV63 AC073325.2-201ENST00000339545 159 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 SNORD56.1-201ENST00000362913 68 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 DYNLT3P1-201ENST00000378574 347 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 RNU6-514P-201ENST00000384208 107 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 RNU6-804P-201ENST00000384286 107 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 MIR493-201ENST00000385254 89 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 MIR591-201ENST00000385290 95 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 SNORA26.3-201ENST00000391119 136 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 MIR888-201ENST00000401186 77 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 FTH1P15-201ENST00000406984 280 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 RNU6-1135P-201ENST00000411083 103 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 RPS26P42-201ENST00000413485 326 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 RPL23AP36-201ENST00000413895 458 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.01□□□□□ -1.93
VRK3Q8IV63 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.01□□□□□ -1.93
VRK3Q8IV63 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.01□□□□□ -1.93
VRK3Q8IV63 AC078809.1-201ENST00000427601 140 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 UQCRBP2-201ENST00000447827 297 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 RPL37P4-201ENST00000448908 268 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 RN7SL20P-201ENST00000488827 297 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 AC016632.1-201ENST00000503994 196 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.01□□□□□ -1.93
VRK3Q8IV63 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.01□□□□□ -1.93
VRK3Q8IV63 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.01□□□□□ -1.93
VRK3Q8IV63 AC008885.1-201ENST00000514930 301 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 RNU6-346P-201ENST00000516288 111 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 CKS1BP7-201ENST00000522230 235 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.01□□□□□ -1.93
VRK3Q8IV63 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.01□□□□□ -1.93
VRK3Q8IV63 AC233702.2-202ENST00000562547 291 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 MIR4308-201ENST00000580634 81 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 AC019159.1-201ENST00000605094 187 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 AC108706.1-201ENST00000611053 297 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
VRK3Q8IV63 IGHVIII-44-202ENST00000636235 289 ntBASIC3.01□□□□□ -1.93
VRK3Q8IV63 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
VRK3Q8IV63 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.01□□□□□ -1.93
VRK3Q8IV63 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.01□□□□□ -1.93
VRK3Q8IV63 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
VRK3Q8IV63 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3□□□□□ -1.93
VRK3Q8IV63 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3□□□□□ -1.93
VRK3Q8IV63 AL672296.1-201ENST00000427780 2158 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms