Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 HSPE1P18-201ENST00000517602 280 ntBASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 AK6P2-201ENST00000549020 471 ntBASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 RPL21P9-201ENST00000556149 474 ntBASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 MIR4423-201ENST00000580922 80 ntBASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 AC008749.1-201ENST00000597650 306 ntBASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 AL133393.1-201ENST00000603277 287 ntBASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
NPAS4Q8IUM7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 Y_RNA.82-201ENST00000363000 102 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 Y_RNA.92-201ENST00000363043 102 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 RNU6-626P-201ENST00000363354 107 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 RNU1-33P-201ENST00000364249 162 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 Y_RNA.235-201ENST00000364412 102 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 Y_RNA.306-201ENST00000365015 102 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 Y_RNA.308-201ENST00000365043 101 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 Y_RNA.312-201ENST00000365089 102 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 Y_RNA.322-201ENST00000365151 102 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 RNU6-514P-201ENST00000384208 107 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 RNU6-1289P-201ENST00000384431 106 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 HMGN2P8-201ENST00000391458 268 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 Y_RNA.650-201ENST00000459002 102 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 RNU6-1219P-201ENST00000516143 112 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 Y_RNA.777-201ENST00000516982 102 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 Y_RNA.771-201ENST00000598668 102 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 Y_RNA.789-201ENST00000622480 102 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 AC018692.3-201ENST00000623929 123 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 MIR3651-201ENST00000630427 90 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 IGHVIII-44-202ENST00000636235 289 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 AL355596.1-201ENST00000565399 3996 ntBASIC3.95□□□□□ -1.78
NPAS4Q8IUM7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 SNORA72.2-201ENST00000365028 127 ntBASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 RNU6-20P-201ENST00000384106 107 ntBASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 RNU6-1310P-201ENST00000384153 107 ntBASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 AC027124.2-201ENST00000428249 105 ntBASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 MICF-203ENST00000432679 129 ntBASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 IFNA11P-201ENST00000446352 526 ntBASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 RPL23AP3-201ENST00000453844 468 ntBASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 BX510359.1-201ENST00000456973 237 ntBASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 RNU6-625P-201ENST00000459412 107 ntBASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 AC008155.2-201ENST00000464337 397 ntBASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 RN7SL330P-201ENST00000469709 307 ntBASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 AC008011.1-201ENST00000545989 227 ntBASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 AC233702.2-202ENST00000562547 291 ntBASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 SNORD11B-201ENST00000607707 90 ntBASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 MAPK10-362ENST00000641864 4484 ntBASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPAS4Q8IUM7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 RNU6-961P-201ENST00000363893 105 ntBASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 SNORD50B-201ENST00000364995 70 ntBASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 Z92545.1-201ENST00000411782 234 ntBASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 MTCO1P5-201ENST00000433573 344 ntBASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 MRPS10P1-201ENST00000448483 130 ntBASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 AC140059.1-201ENST00000489238 361 ntBASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 SNORA27.4-201ENST00000516650 95 ntBASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 MIR4308-201ENST00000580634 81 ntBASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 MIR5006-201ENST00000583027 110 ntBASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 AC005176.2-201ENST00000596933 147 ntBASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 MIR7515-201ENST00000637837 67 ntBASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
NPAS4Q8IUM7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 UBE2WP1-201ENST00000362030 340 ntBASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 MIR410-201ENST00000362222 80 ntBASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 RNU6-1175P-201ENST00000365200 107 ntBASIC3.92□□□□□ -1.78
NPAS4Q8IUM7 Y_RNA.498-201ENST00000384460 102 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms