Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 Y_RNA.556-201ENST00000384677 113 ntBASIC3.34□□□□□ -1.87
DDX53Q86TM3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
DDX53Q86TM3 SNORD12B-201ENST00000410433 91 ntBASIC3.34□□□□□ -1.87
DDX53Q86TM3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.34□□□□□ -1.87
DDX53Q86TM3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.34□□□□□ -1.87
DDX53Q86TM3 RN7SL429P-201ENST00000479090 223 ntBASIC3.34□□□□□ -1.87
DDX53Q86TM3 AC021205.2-201ENST00000480069 347 ntBASIC3.34□□□□□ -1.87
DDX53Q86TM3 RN7SL489P-201ENST00000486185 223 ntBASIC3.34□□□□□ -1.87
DDX53Q86TM3 RN7SL327P-201ENST00000488659 223 ntBASIC3.34□□□□□ -1.87
DDX53Q86TM3 RNU6-1143P-201ENST00000516125 104 ntBASIC3.34□□□□□ -1.87
DDX53Q86TM3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX53Q86TM3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX53Q86TM3 AC103810.1-201ENST00000579873 453 ntBASIC3.34□□□□□ -1.87
DDX53Q86TM3 Y_RNA.772-201ENST00000606692 102 ntBASIC3.34□□□□□ -1.87
DDX53Q86TM3 PCGEM1.1-201ENST00000613431 131 ntBASIC3.34□□□□□ -1.87
DDX53Q86TM3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.34□□□□□ -1.87
DDX53Q86TM3 AC010205.1-201ENST00000616668 449 ntBASIC3.34□□□□□ -1.87
DDX53Q86TM3 RN7SL853P-201ENST00000617250 223 ntBASIC3.34□□□□□ -1.87
DDX53Q86TM3 SNORA50A-202ENST00000629536 136 ntBASIC3.34□□□□□ -1.87
DDX53Q86TM3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
DDX53Q86TM3 AL365361.1-201ENST00000566942 3481 ntBASIC3.34□□□□□ -1.87
DDX53Q86TM3 AC110774.1-201ENST00000623567 2018 ntBASIC3.34□□□□□ -1.88
DDX53Q86TM3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.33□□□□□ -1.88
DDX53Q86TM3 AC000403.1-201ENST00000613696 3585 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 MAPK10-362ENST00000641864 4484 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 SNORA5B-201ENST00000363786 132 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 RNU6-280P-201ENST00000364145 104 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 Y_RNA.461-201ENST00000384263 103 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 AL079342.1-201ENST00000401460 267 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 RNA5SP201-201ENST00000410316 124 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 RNU6-121P-201ENST00000410525 99 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 RN7SKP284-201ENST00000411002 343 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 EIF4EP4-201ENST00000424916 578 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX53Q86TM3 RPS3P1-201ENST00000456781 192 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 AC007215.1-201ENST00000464893 276 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 AC145146.1-201ENST00000496370 254 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 RNA5SP112-201ENST00000515937 99 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 RN7SKP49-201ENST00000516675 260 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 MIR2276-201ENST00000516886 89 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 AC093331.1-201ENST00000521474 169 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.33□□□□□ -1.88
DDX53Q86TM3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.33□□□□□ -1.88
DDX53Q86TM3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
DDX53Q86TM3 AC107294.3-201ENST00000609211 526 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.33□□□□□ -1.88
DDX53Q86TM3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.33□□□□□ -1.88
DDX53Q86TM3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
DDX53Q86TM3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.33□□□□□ -1.88
DDX53Q86TM3 Y_RNA.143-201ENST00000363520 106 ntBASIC3.32□□□□□ -1.88
DDX53Q86TM3 MIR329-1-201ENST00000385028 80 ntBASIC3.32□□□□□ -1.88
DDX53Q86TM3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.32□□□□□ -1.88
DDX53Q86TM3 AC112220.1-201ENST00000434628 355 ntBASIC3.32□□□□□ -1.88
DDX53Q86TM3 RPS29P12-201ENST00000460178 152 ntBASIC3.32□□□□□ -1.88
DDX53Q86TM3 AC146507.2-201ENST00000460608 476 ntBASIC3.32□□□□□ -1.88
DDX53Q86TM3 AC103975.1-201ENST00000482506 483 ntBASIC3.32□□□□□ -1.88
DDX53Q86TM3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX53Q86TM3 SNORA25.14-201ENST00000516481 132 ntBASIC3.32□□□□□ -1.88
DDX53Q86TM3 Y_RNA.713-201ENST00000517013 96 ntBASIC3.32□□□□□ -1.88
DDX53Q86TM3 SCARNA11.3-201ENST00000517276 130 ntBASIC3.32□□□□□ -1.88
DDX53Q86TM3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.32□□□□□ -1.88
DDX53Q86TM3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX53Q86TM3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.32□□□□□ -1.88
DDX53Q86TM3 AP003733.2-201ENST00000529409 171 ntBASIC3.32□□□□□ -1.88
DDX53Q86TM3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX53Q86TM3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX53Q86TM3 AC103988.1-201ENST00000566382 2177 ntBASIC3.32□□□□□ -1.88
DDX53Q86TM3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DDX53Q86TM3 RNU1-75P-201ENST00000347264 129 ntBASIC3.31□□□□□ -1.88
DDX53Q86TM3 Y_RNA.376-201ENST00000365638 108 ntBASIC3.31□□□□□ -1.88
DDX53Q86TM3 AP002088.1-201ENST00000382740 395 ntBASIC3.31□□□□□ -1.88
DDX53Q86TM3 RNU6-472P-201ENST00000384299 107 ntBASIC3.31□□□□□ -1.88
DDX53Q86TM3 MT-TW-201ENST00000387382 68 ntBASIC3.31□□□□□ -1.88
DDX53Q86TM3 AL512633.1-201ENST00000399931 655 ntBASIC3.31□□□□□ -1.88
DDX53Q86TM3 RNU2-20P-201ENST00000410425 191 ntBASIC3.31□□□□□ -1.88
DDX53Q86TM3 RPL21P38-201ENST00000418090 167 ntBASIC3.31□□□□□ -1.88
DDX53Q86TM3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX53Q86TM3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.31□□□□□ -1.88
DDX53Q86TM3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX53Q86TM3 AC010095.1-201ENST00000443543 144 ntBASIC3.31□□□□□ -1.88
DDX53Q86TM3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX53Q86TM3 AC098869.1-201ENST00000481627 292 ntBASIC3.31□□□□□ -1.88
DDX53Q86TM3 Y_RNA.668-201ENST00000516233 93 ntBASIC3.31□□□□□ -1.88
DDX53Q86TM3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.31□□□□□ -1.88
DDX53Q86TM3 AC136932.1-201ENST00000574771 208 ntBASIC3.31□□□□□ -1.88
DDX53Q86TM3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX53Q86TM3 RPL30P11-203ENST00000598995 310 ntBASIC3.31□□□□□ -1.88
DDX53Q86TM3 MIR7515-201ENST00000637837 67 ntBASIC3.31□□□□□ -1.88
DDX53Q86TM3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
DDX53Q86TM3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDX53Q86TM3 BX322639.1-202ENST00000423987 2213 ntBASIC3.31□□□□□ -1.88
DDX53Q86TM3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DDX53Q86TM3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
DDX53Q86TM3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
DDX53Q86TM3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX53Q86TM3 RNU6-486P-201ENST00000363116 107 ntBASIC3.3□□□□□ -1.88
DDX53Q86TM3 RNU6-1145P-201ENST00000384246 107 ntBASIC3.3□□□□□ -1.88
DDX53Q86TM3 SNORA46.1-201ENST00000391069 153 ntBASIC3.3□□□□□ -1.88
DDX53Q86TM3 MIR1302-6-201ENST00000408466 90 ntBASIC3.3□□□□□ -1.88
DDX53Q86TM3 RNA5SP293-201ENST00000410527 113 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 194.8 ms