Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 FAM206BP-201ENST00000510179 541 ntBASIC2.22□□□□□ -2.05
NPHP3Q7Z494 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.22□□□□□ -2.05
NPHP3Q7Z494 SNORA4.4-201ENST00000515921 135 ntBASIC2.22□□□□□ -2.05
NPHP3Q7Z494 RNU2-53P-201ENST00000516257 147 ntBASIC2.22□□□□□ -2.05
NPHP3Q7Z494 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.22□□□□□ -2.05
NPHP3Q7Z494 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.22□□□□□ -2.05
NPHP3Q7Z494 AC093249.1-201ENST00000567049 203 ntBASIC2.22□□□□□ -2.05
NPHP3Q7Z494 AC104581.2-201ENST00000572227 430 ntBASIC2.22□□□□□ -2.05
NPHP3Q7Z494 MIR4421-201ENST00000578133 69 ntBASIC2.22□□□□□ -2.05
NPHP3Q7Z494 RNU6-212P-201ENST00000362642 104 ntBASIC2.21□□□□□ -2.06
NPHP3Q7Z494 U3.13-201ENST00000364804 214 ntBASIC2.21□□□□□ -2.06
NPHP3Q7Z494 MIR95-201ENST00000385072 81 ntBASIC2.21□□□□□ -2.06
NPHP3Q7Z494 RPS29P13-201ENST00000402041 169 ntBASIC2.21□□□□□ -2.06
NPHP3Q7Z494 AL591034.2-201ENST00000402839 359 ntBASIC2.21□□□□□ -2.06
NPHP3Q7Z494 RNU2-23P-201ENST00000410545 195 ntBASIC2.21□□□□□ -2.06
NPHP3Q7Z494 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.21□□□□□ -2.06
NPHP3Q7Z494 RPL30P16-201ENST00000419341 429 ntBASIC2.21□□□□□ -2.06
NPHP3Q7Z494 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.21□□□□□ -2.06
NPHP3Q7Z494 AL513185.2-201ENST00000425543 193 ntBASIC2.21□□□□□ -2.06
NPHP3Q7Z494 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.21□□□□□ -2.06
NPHP3Q7Z494 RNA5SP102-201ENST00000516865 106 ntBASIC2.21□□□□□ -2.06
NPHP3Q7Z494 SNORA48.11-201ENST00000517015 89 ntBASIC2.21□□□□□ -2.06
NPHP3Q7Z494 AL161670.1-201ENST00000554348 137 ntBASIC2.21□□□□□ -2.06
NPHP3Q7Z494 SNORA59B-202ENST00000578183 701 ntBASIC2.21□□□□□ -2.06
NPHP3Q7Z494 MIR4452-201ENST00000583004 71 ntBASIC2.21□□□□□ -2.06
NPHP3Q7Z494 RMST_6.1-201ENST00000611980 203 ntBASIC2.21□□□□□ -2.06
NPHP3Q7Z494 uc_338.15-201ENST00000615470 191 ntBASIC2.21□□□□□ -2.06
NPHP3Q7Z494 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.21□□□□□ -2.06
NPHP3Q7Z494 Y_RNA.86-201ENST00000363020 111 ntBASIC2.2□□□□□ -2.06
NPHP3Q7Z494 RNU6-1329P-201ENST00000365664 107 ntBASIC2.2□□□□□ -2.06
NPHP3Q7Z494 SNORA32.2-201ENST00000384049 122 ntBASIC2.2□□□□□ -2.06
NPHP3Q7Z494 MIR561-201ENST00000385216 97 ntBASIC2.2□□□□□ -2.06
NPHP3Q7Z494 SNORA67.6-201ENST00000391093 99 ntBASIC2.2□□□□□ -2.06
NPHP3Q7Z494 RNU6-174P-201ENST00000410406 106 ntBASIC2.2□□□□□ -2.06
NPHP3Q7Z494 VN1R36P-201ENST00000414936 291 ntBASIC2.2□□□□□ -2.06
NPHP3Q7Z494 EDDM3CP-201ENST00000415977 425 ntBASIC2.2□□□□□ -2.06
NPHP3Q7Z494 AL359672.1-201ENST00000442302 409 ntBASIC2.2□□□□□ -2.06
NPHP3Q7Z494 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.2□□□□□ -2.06
NPHP3Q7Z494 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.2□□□□□ -2.06
NPHP3Q7Z494 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.2□□□□□ -2.06
NPHP3Q7Z494 AMD1P1-201ENST00000457220 922 ntBASIC2.2□□□□□ -2.06
NPHP3Q7Z494 AL121594.1-201ENST00000475906 575 ntBASIC2.2□□□□□ -2.06
NPHP3Q7Z494 RNU6-1314P-201ENST00000517139 104 ntBASIC2.2□□□□□ -2.06
NPHP3Q7Z494 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.2□□□□□ -2.06
NPHP3Q7Z494 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.2□□□□□ -2.06
NPHP3Q7Z494 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.2□□□□□ -2.06
NPHP3Q7Z494 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.2□□□□□ -2.06
NPHP3Q7Z494 ANP32BP3-201ENST00000559213 706 ntBASIC2.2□□□□□ -2.06
NPHP3Q7Z494 MIR3942-201ENST00000585264 109 ntBASIC2.2□□□□□ -2.06
NPHP3Q7Z494 AC090517.3-201ENST00000625170 141 ntBASIC2.2□□□□□ -2.06
NPHP3Q7Z494 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
NPHP3Q7Z494 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.19□□□□□ -2.06
NPHP3Q7Z494 RNU1-23P-201ENST00000363361 144 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 Y_RNA.530-201ENST00000384587 101 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 RNU6-1245P-201ENST00000411130 106 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 MTCO3P18-201ENST00000440206 761 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 MTCO2P3-201ENST00000442543 421 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.19□□□□□ -2.06
NPHP3Q7Z494 HMGN1P7-201ENST00000491722 313 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 RNU6-586P-201ENST00000517265 104 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 AC109329.1-201ENST00000518744 317 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 MIR3618-201ENST00000580330 88 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 MIR3672-201ENST00000584290 82 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 BNIP3P16-201ENST00000589779 534 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NPHP3Q7Z494 AC068944.2-201ENST00000610373 403 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 AC022202.1-201ENST00000613515 211 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 AL159153.1-201ENST00000619688 317 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 AC006504.8-201ENST00000621046 635 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 AL136221.1-201ENST00000621449 509 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 MIR203B-201ENST00000636080 86 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.19□□□□□ -2.06
NPHP3Q7Z494 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.19□□□□□ -2.06
NPHP3Q7Z494 Y_RNA.157-201ENST00000363638 102 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 SNORD113-7-201ENST00000363762 77 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 SNORA16B-201ENST00000364674 135 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 SNORA25B-201ENST00000365507 128 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 Y_RNA.414-201ENST00000384011 101 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 RNU6-43P-201ENST00000384302 107 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 RNU6-831P-201ENST00000384548 107 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 RNA5SP118-201ENST00000410385 109 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 AL590632.1-201ENST00000424289 371 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 MTND1P2-201ENST00000430604 821 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.18□□□□□ -2.06
NPHP3Q7Z494 SNAP23P1-201ENST00000433229 246 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.18□□□□□ -2.06
NPHP3Q7Z494 AC091874.1-201ENST00000511402 339 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 RNU6-358P-201ENST00000516564 75 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 RNU6-273P-201ENST00000516937 96 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 SNORA31.25-201ENST00000517242 134 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 AC107953.1-201ENST00000522216 297 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 AF235103.2-201ENST00000525753 346 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.18□□□□□ -2.06
NPHP3Q7Z494 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.18□□□□□ -2.06
NPHP3Q7Z494 TRAV32-201ENST00000553993 340 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.18□□□□□ -2.06
NPHP3Q7Z494 MIR6840-201ENST00000611937 71 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 RMST_2.1-201ENST00000617263 136 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 AC007792.1-201ENST00000623023 402 ntBASIC2.18□□□□□ -2.06
NPHP3Q7Z494 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms