Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNU2-64P-201ENST00000411315 191 ntBASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 AIMP1P2-201ENST00000425294 312 ntBASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 AL357552.1-201ENST00000445254 415 ntBASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 RPS27P29-201ENST00000463110 252 ntBASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 AC117440.1-201ENST00000474107 571 ntBASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 AC021205.2-201ENST00000480069 347 ntBASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 SNORA40.9-201ENST00000515895 93 ntBASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 Y_RNA.700-201ENST00000516806 100 ntBASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 AC093331.1-201ENST00000521474 169 ntBASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 AC233702.2-202ENST00000562547 291 ntBASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 MIR5004-201ENST00000579078 107 ntBASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 MIR4325-201ENST00000583049 90 ntBASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 RNU1-62P-201ENST00000362599 164 ntBASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 RNA5SP383-201ENST00000362934 120 ntBASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 Y_RNA.179-201ENST00000363844 90 ntBASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 SNORA14A-201ENST00000364773 135 ntBASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 SNORA53-201ENST00000391141 249 ntBASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 MIR208B-201ENST00000401172 77 ntBASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 RNU6-1140P-201ENST00000410517 106 ntBASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 AL031183.1-201ENST00000457667 207 ntBASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 SNORA25.14-201ENST00000516481 132 ntBASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 RNU6-111P-201ENST00000517179 105 ntBASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 AC079598.5-201ENST00000547460 117 ntBASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 AC026470.2-201ENST00000561492 181 ntBASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 AC007496.3-201ENST00000624987 3443 ntBASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 AL109809.4-201ENST00000603520 2185 ntBASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RUFY4Q6ZNE9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 RNU6-626P-201ENST00000363354 107 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 RNU6-1210P-201ENST00000363775 107 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 RNY1-201ENST00000364228 113 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 RNU6-326P-201ENST00000365480 107 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 MIR767-201ENST00000390228 109 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 CBX3P9-201ENST00000402326 552 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 AL133475.1-201ENST00000404414 305 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 RNA5SP201-201ENST00000410316 124 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 RNU2-20P-201ENST00000410425 191 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 HSPE1P25-201ENST00000455484 251 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 RPS3P1-201ENST00000456781 192 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 HMGN1P18-201ENST00000457642 277 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 SERF1AP1-201ENST00000514575 187 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 RNU4-71P-201ENST00000516258 113 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 SNORA70.19-201ENST00000516717 90 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 AL162274.2-201ENST00000614406 332 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 MIR6852-201ENST00000621699 66 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 ZNF204P-201ENST00000416749 2397 ntBASIC3.67□□□□□ -1.82
RUFY4Q6ZNE9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 RNU6-655P-201ENST00000362858 107 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 RNU6-200P-201ENST00000364743 107 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 RNU6-793P-201ENST00000384233 104 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 RNU1-57P-201ENST00000384491 166 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 Y_RNA.570-201ENST00000384750 101 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 MIR186-201ENST00000384988 86 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 AL603910.2-201ENST00000407268 136 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 AL445305.1-201ENST00000432577 575 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 AC010095.1-201ENST00000443543 144 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 AC006445.1-201ENST00000491925 405 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 SNORA64.4-201ENST00000516632 81 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 RNU6-711P-201ENST00000517255 106 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 AC026241.1-201ENST00000517873 2142 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 LARP7P3-201ENST00000579888 337 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 AC009779.6-201ENST00000603972 165 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 AC037487.3-201ENST00000606668 112 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 PCGEM1.1-201ENST00000613431 131 ntBASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RUFY4Q6ZNE9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RUFY4Q6ZNE9 AC099654.7-201ENST00000635788 2127 ntBASIC3.65□□□□□ -1.82
RUFY4Q6ZNE9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.65□□□□□ -1.82
RUFY4Q6ZNE9 MTND5P35-201ENST00000557537 1720 ntBASIC3.65□□□□□ -1.82
RUFY4Q6ZNE9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 421 ms