Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC009127.3-201ENST00000570531 403 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 MIR5187-201ENST00000583479 76 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 PCGEM1.1-201ENST00000613431 131 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 AC022149.2-201ENST00000621061 203 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 MTND1P7-201ENST00000632801 297 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 AC068647.1-201ENST00000489539 2265 ntBASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 Y_RNA.182-201ENST00000363880 111 ntBASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 RNU6-1081P-201ENST00000384537 107 ntBASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 MIR147B-201ENST00000390185 80 ntBASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 RNU6-763P-201ENST00000390865 106 ntBASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 BMS1P22-201ENST00000414726 313 ntBASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 AC006539.3-201ENST00000454258 129 ntBASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 U8.19-201ENST00000459095 133 ntBASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 AC021205.2-201ENST00000480069 347 ntBASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 RNU1-117P-201ENST00000517041 158 ntBASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 RNU1-45P-201ENST00000517191 141 ntBASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 AC008011.1-201ENST00000545989 227 ntBASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RNF111Q6ZNA4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
RNF111Q6ZNA4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 SNORD114-19-201ENST00000363072 75 ntBASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 RNU4-17P-201ENST00000365598 141 ntBASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 Y_RNA.412-201ENST00000384001 104 ntBASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 RNU6-198P-201ENST00000384258 104 ntBASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 MIR134-201ENST00000385258 73 ntBASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 Y_RNA.580-201ENST00000391004 95 ntBASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 RNA5SP201-201ENST00000410316 124 ntBASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 AL445584.1-201ENST00000431451 330 ntBASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 AC004386.2-201ENST00000441858 148 ntBASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 AL441985.1-201ENST00000457727 251 ntBASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 RPL23AP70-201ENST00000483361 460 ntBASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 RPL32P34-201ENST00000486380 400 ntBASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 DEFB131C-201ENST00000528817 165 ntBASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 AC005562.2-201ENST00000618264 111 ntBASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 AL034408.1-202ENST00000636088 415 ntBASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 AC010889.1-201ENST00000566193 2666 ntBASIC3.46□□□□□ -1.86
RNF111Q6ZNA4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 RNU1-75P-201ENST00000347264 129 ntBASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 RNU4-15P-201ENST00000362613 141 ntBASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 RNU6-1010P-201ENST00000362757 107 ntBASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 SNORA18.2-201ENST00000383865 132 ntBASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 RNU6-449P-201ENST00000383914 107 ntBASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 RNU2-37P-201ENST00000410695 177 ntBASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 AC245291.1-201ENST00000419501 328 ntBASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 AIMP1P2-201ENST00000425294 312 ntBASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 SEPT7P4-201ENST00000437076 306 ntBASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 AC023632.4-201ENST00000517783 191 ntBASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 EIF4A1P12-201ENST00000551910 141 ntBASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 AC006130.2-201ENST00000586202 326 ntBASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 RNU6-91P-201ENST00000607774 107 ntBASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 AP000553.6-201ENST00000641242 118 ntBASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.45□□□□□ -1.86
RNF111Q6ZNA4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 U3.9-201ENST00000363823 204 ntBASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 U8.11-201ENST00000384699 133 ntBASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 U8.12-201ENST00000384701 133 ntBASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 HMGN2P20-201ENST00000437531 273 ntBASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 U8.18-201ENST00000459285 133 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms