Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 TPT1P7-201ENST00000458300 517 ntBASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 RNU7-14P-201ENST00000459331 62 ntBASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 AC010409.1-201ENST00000487382 476 ntBASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 AC021146.2-201ENST00000504736 556 ntBASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 RPL39P5-202ENST00000512505 151 ntBASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 RNU6-612P-201ENST00000516909 102 ntBASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 SNORA44.1-201ENST00000517031 108 ntBASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 CENPUP1-201ENST00000526649 1202 ntBASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 AP003034.1-201ENST00000534621 422 ntBASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 AP001330.5-201ENST00000607176 411 ntBASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 AC064807.4-201ENST00000607201 407 ntBASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 AC017083.3-201ENST00000609955 700 ntBASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 AC103705.1-201ENST00000619013 241 ntBASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.4□□□□□ -2.19
TRIM40Q6P9F5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 RNU6-661P-201ENST00000362409 107 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 RNU6-997P-201ENST00000384725 107 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 RNY3P9-201ENST00000384727 106 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 MIR30A-201ENST00000385092 71 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 SNORD37.1-201ENST00000390968 65 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 DEFB108C-201ENST00000400154 252 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 MIR934-201ENST00000401241 83 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 AC016925.1-201ENST00000458303 298 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 RNU6-1037P-201ENST00000459571 107 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 AC097473.1-201ENST00000508142 408 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 RNU6-1069P-201ENST00000516612 133 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 SNORA31.17-201ENST00000516953 127 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 AC087854.1-201ENST00000519706 414 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 AP005597.4-201ENST00000526762 229 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 AC090517.1-201ENST00000569307 266 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 AL645939.4-201ENST00000604495 135 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 AC139792.3-201ENST00000623525 224 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 AC009541.1-201ENST00000438279 2662 ntBASIC1.39□□□□□ -2.19
TRIM40Q6P9F5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 SNRPGP13-201ENST00000442212 177 ntBASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 AC112492.4-201ENST00000456549 352 ntBASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 RNU1-98P-201ENST00000458992 160 ntBASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 RPS29P27-201ENST00000463711 170 ntBASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 AC027575.1-201ENST00000481064 460 ntBASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 AC016256.1-201ENST00000547971 354 ntBASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 AC092747.3-201ENST00000603769 301 ntBASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 AC016925.2-201ENST00000605108 242 ntBASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 RN7SKP299-201ENST00000606679 301 ntBASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.38□□□□□ -2.19
TRIM40Q6P9F5 MIR424-201ENST00000362227 98 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 U8.1-201ENST00000362843 134 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 RNU6-227P-201ENST00000362865 103 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 RNU6-439P-201ENST00000384188 106 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 RNU6-1119P-201ENST00000384349 108 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 RNU4-62P-201ENST00000410125 130 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 RNU6-174P-201ENST00000410406 106 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 AL663109.1-201ENST00000411498 844 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 AL603825.1-201ENST00000438481 80 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 Y_RNA.638-201ENST00000459374 113 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 RNU6-261P-201ENST00000459506 102 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 AC083798.1-201ENST00000472671 131 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 RPS23P5-201ENST00000495419 428 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 RNA5SP401-201ENST00000515920 127 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 RNU6-1038P-201ENST00000516516 104 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 Y_RNA.688-201ENST00000516565 95 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 SUMO2P18-201ENST00000518873 252 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 AC104383.1-201ENST00000530297 370 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 AL118558.2-201ENST00000556294 238 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 MIR5094-201ENST00000578766 85 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 AC064836.2-201ENST00000609491 462 ntBASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM40Q6P9F5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 RNU6-112P-201ENST00000363599 104 ntBASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 RNU4-13P-201ENST00000364019 141 ntBASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 RNU6-1322P-201ENST00000364309 107 ntBASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 RNU4-66P-201ENST00000365199 138 ntBASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 SNORD116-9-201ENST00000384000 95 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms