Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNU4-42P-201ENST00000364738 142 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 RNU6-234P-201ENST00000365229 104 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 RNY1P14-201ENST00000384426 108 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 RNU6-308P-201ENST00000390957 107 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 RNA5SP120-201ENST00000410900 112 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.78□□□□□ -1.96
RNF220Q5VTB9 EIF1P2-201ENST00000428233 350 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 AC004386.2-201ENST00000441858 148 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 AC009238.1-201ENST00000442165 424 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 AC009237.6-201ENST00000446969 424 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 MTCO3P8-201ENST00000453691 755 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.78□□□□□ -1.96
RNF220Q5VTB9 AC107032.1-201ENST00000485945 480 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 RPS23P5-201ENST00000495419 428 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 SNORA25.14-201ENST00000516481 132 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 UBL5P4-201ENST00000562584 236 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.78□□□□□ -1.96
RNF220Q5VTB9 MIR4429-201ENST00000580105 73 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 MIR5006-201ENST00000583027 110 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 AL356055.1-201ENST00000602528 446 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.78□□□□□ -1.96
RNF220Q5VTB9 AL162274.2-201ENST00000614406 332 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 AC012314.7-201ENST00000619693 93 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 AC010297.1-201ENST00000623948 149 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.78□□□□□ -1.96
RNF220Q5VTB9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
RNF220Q5VTB9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.77□□□□□ -1.97
RNF220Q5VTB9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RNF220Q5VTB9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 RNU6-873P-201ENST00000363833 107 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 RNY3P11-201ENST00000364153 102 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 SNORA25B-201ENST00000365507 128 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 RPL19P1-201ENST00000411635 428 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 AC096638.1-201ENST00000444678 216 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 MTND4P19-201ENST00000446659 478 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 RN7SL807P-201ENST00000470923 297 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 AL163540.1-201ENST00000485382 386 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.77□□□□□ -1.97
RNF220Q5VTB9 RNU6-911P-201ENST00000516523 104 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 RNU5F-4P-201ENST00000516581 114 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.77□□□□□ -1.97
RNF220Q5VTB9 MIR5695-201ENST00000579717 85 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 AC083806.3-201ENST00000614016 455 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 AC084757.4-201ENST00000616350 526 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 AL138825.1-201ENST00000618587 192 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 U2.1-201ENST00000618978 145 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 MIR6075-201ENST00000620782 95 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 AC138305.3-201ENST00000624988 240 ntBASIC2.77□□□□□ -1.97
RNF220Q5VTB9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RNF220Q5VTB9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RNF220Q5VTB9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RNF220Q5VTB9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.76□□□□□ -1.97
RNF220Q5VTB9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RNF220Q5VTB9 MIR22-201ENST00000362190 85 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 RNU1-76P-201ENST00000362903 159 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 RNU6-281P-201ENST00000384212 103 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 SNORA54-201ENST00000384281 123 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
RNF220Q5VTB9 RNA5SP213-201ENST00000391031 106 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RNF220Q5VTB9 MCFD2P1-201ENST00000417812 300 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 AC096644.2-201ENST00000429278 159 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 AL445305.1-201ENST00000432577 575 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF220Q5VTB9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.76□□□□□ -1.97
RNF220Q5VTB9 PRSS3P4-201ENST00000453323 162 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF220Q5VTB9 AC117440.1-201ENST00000474107 571 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 AC018868.1-201ENST00000491307 315 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF220Q5VTB9 SNORA25.10-201ENST00000515926 124 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 RNU4-77P-201ENST00000516692 156 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 Y_RNA.711-201ENST00000516993 102 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 AC022868.1-201ENST00000517767 391 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 DEFB131C-201ENST00000528817 165 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 AL442663.2-201ENST00000554385 511 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF220Q5VTB9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF220Q5VTB9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.76□□□□□ -1.97
RNF220Q5VTB9 VN1R91P-201ENST00000594377 169 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.76□□□□□ -1.97
RNF220Q5VTB9 AC007485.1-201ENST00000616755 206 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 AL132822.1-201ENST00000617063 513 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 AC007318.2-201ENST00000620999 243 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.76□□□□□ -1.97
RNF220Q5VTB9 MIR1248-201ENST00000629190 106 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 AL606534.2-204ENST00000635008 178 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 MIR4272-201ENST00000635924 64 ntBASIC2.76□□□□□ -1.97
RNF220Q5VTB9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
RNF220Q5VTB9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
RNF220Q5VTB9 RNU1-35P-201ENST00000362782 153 ntBASIC2.75□□□□□ -1.97
RNF220Q5VTB9 Y_RNA.202-201ENST00000364083 110 ntBASIC2.75□□□□□ -1.97
RNF220Q5VTB9 XGY1-201ENST00000381172 446 ntBASIC2.75□□□□□ -1.97
RNF220Q5VTB9 RNU1-109P-201ENST00000383960 147 ntBASIC2.75□□□□□ -1.97
RNF220Q5VTB9 SNORA18.3-201ENST00000384122 132 ntBASIC2.75□□□□□ -1.97
RNF220Q5VTB9 RNU6-611P-201ENST00000384276 104 ntBASIC2.75□□□□□ -1.97
RNF220Q5VTB9 MIR628-201ENST00000385229 95 ntBASIC2.75□□□□□ -1.97
RNF220Q5VTB9 RNU2-48P-201ENST00000410694 191 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms