Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC38Q502W7 RNU6-234P-201ENST00000365229 104 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 Y_RNA.384-201ENST00000383909 102 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 Y_RNA.387-201ENST00000383918 102 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 Y_RNA.404-201ENST00000383978 102 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 U8.10-201ENST00000384260 133 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 MIR32-201ENST00000384965 70 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 MIR9-1-201ENST00000385198 89 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 RNU2-52P-201ENST00000410680 190 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 RNU2-41P-201ENST00000410991 178 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 EDDM3CP-201ENST00000415977 425 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC38Q502W7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC38Q502W7 AC107032.1-201ENST00000485945 480 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC38Q502W7 ANXA2P1-201ENST00000505539 926 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 RNU7-175P-201ENST00000515915 61 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 MIR449C-201ENST00000516047 92 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 RNU6-559P-201ENST00000516151 98 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC38Q502W7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC38Q502W7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC38Q502W7 AC026470.2-201ENST00000561492 181 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC38Q502W7 AC026271.5-201ENST00000577873 130 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 ELOCP29-201ENST00000588193 334 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 AC006023.1-201ENST00000603944 259 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 AL669831.3-213ENST00000636676 183 ntBASIC2.62□□□□□ -1.99
CCDC38Q502W7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CCDC38Q502W7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC38Q502W7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC38Q502W7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC38Q502W7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CCDC38Q502W7 Y_RNA.48-201ENST00000362710 103 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 Y_RNA.70-201ENST00000362886 110 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 RNU6-1188P-201ENST00000363795 107 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 MIR153-2-201ENST00000385225 87 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 AL357139.1-201ENST00000407792 426 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 SNORD109B-201ENST00000458961 67 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 SNORD109A-201ENST00000459128 67 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 RPL30P10-201ENST00000488148 337 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC38Q502W7 RNA5SP356-201ENST00000515972 94 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 RNA5SP137-201ENST00000516833 135 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 RNU6-1198P-201ENST00000516904 67 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC38Q502W7 AC104581.2-201ENST00000572227 430 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 RPS3AP23-202ENST00000574601 686 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC38Q502W7 MIR5694-201ENST00000581190 76 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
CCDC38Q502W7 AC016727.2-201ENST00000603988 621 ntBASIC2.61□□□□□ -1.99
CCDC38Q502W7 RNU6-743P-201ENST00000364151 106 ntBASIC2.6□□□□□ -1.99
CCDC38Q502W7 RNU6-1297P-201ENST00000384415 104 ntBASIC2.6□□□□□ -1.99
CCDC38Q502W7 SRIP3-201ENST00000413200 219 ntBASIC2.6□□□□□ -1.99
CCDC38Q502W7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC38Q502W7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC38Q502W7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC38Q502W7 AL035666.1-201ENST00000446195 348 ntBASIC2.6□□□□□ -1.99
CCDC38Q502W7 AL137159.1-201ENST00000452808 512 ntBASIC2.6□□□□□ -1.99
CCDC38Q502W7 PRELID3BP1-201ENST00000457142 540 ntBASIC2.6□□□□□ -1.99
CCDC38Q502W7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC38Q502W7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC38Q502W7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC38Q502W7 RNA5SP384-201ENST00000516615 116 ntBASIC2.6□□□□□ -1.99
CCDC38Q502W7 RNA5SP54-201ENST00000516951 92 ntBASIC2.6□□□□□ -1.99
CCDC38Q502W7 IGLV3-17-201ENST00000519099 244 ntBASIC2.6□□□□□ -1.99
CCDC38Q502W7 APOOP3-201ENST00000536787 586 ntBASIC2.6□□□□□ -1.99
CCDC38Q502W7 AC233702.2-202ENST00000562547 291 ntBASIC2.6□□□□□ -1.99
CCDC38Q502W7 LARP7P1-201ENST00000605576 316 ntBASIC2.6□□□□□ -1.99
CCDC38Q502W7 AC005014.2-201ENST00000607795 599 ntBASIC2.6□□□□□ -1.99
CCDC38Q502W7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC38Q502W7 Y_RNA.804-201ENST00000615262 101 ntBASIC2.6□□□□□ -1.99
CCDC38Q502W7 AC245884.12-201ENST00000615364 59 ntBASIC2.6□□□□□ -1.99
CCDC38Q502W7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC38Q502W7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC38Q502W7 RNU1-76P-201ENST00000362903 159 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 RNU6-137P-201ENST00000363680 108 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 SNORD115-8-201ENST00000363856 82 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 SNORA3A-201ENST00000364113 130 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 SNORD115-38-201ENST00000365037 82 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 Y_RNA.356-201ENST00000365475 113 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 RNU6-17P-201ENST00000384245 107 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 RNU6-18P-201ENST00000384527 107 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 Y_RNA.529-201ENST00000384586 119 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 SNORA41-201ENST00000384675 132 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 RNU6-331P-201ENST00000384724 107 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 SNORA12.2-201ENST00000391040 156 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC38Q502W7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC38Q502W7 RPS23P5-201ENST00000495419 428 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 RNU5F-4P-201ENST00000516581 114 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 FRG2DP-202ENST00000566967 323 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 SNRPGP20-201ENST00000604477 205 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 AC005562.2-201ENST00000618264 111 ntBASIC2.59□□□□□ -1.99
CCDC38Q502W7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC38Q502W7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 384.1 ms