Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 Y_RNA.784-201ENST00000613803 101 ntBASIC3.47□□□□□ -1.85
CCDC144BQ3MJ40 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC144BQ3MJ40 Y_RNA.787-201ENST00000616522 101 ntBASIC3.47□□□□□ -1.85
CCDC144BQ3MJ40 Y_RNA.780-201ENST00000617336 101 ntBASIC3.47□□□□□ -1.85
CCDC144BQ3MJ40 Y_RNA.801-201ENST00000619005 101 ntBASIC3.47□□□□□ -1.85
CCDC144BQ3MJ40 AL606534.2-204ENST00000635008 178 ntBASIC3.47□□□□□ -1.85
CCDC144BQ3MJ40 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC144BQ3MJ40 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC144BQ3MJ40 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
CCDC144BQ3MJ40 Y_RNA.31-201ENST00000362574 102 ntBASIC3.46□□□□□ -1.86
CCDC144BQ3MJ40 Y_RNA.358-201ENST00000365491 99 ntBASIC3.46□□□□□ -1.86
CCDC144BQ3MJ40 MIR561-201ENST00000385216 97 ntBASIC3.46□□□□□ -1.86
CCDC144BQ3MJ40 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC144BQ3MJ40 AP000870.1-201ENST00000472927 406 ntBASIC3.46□□□□□ -1.86
CCDC144BQ3MJ40 RNA5SP356-201ENST00000515972 94 ntBASIC3.46□□□□□ -1.86
CCDC144BQ3MJ40 RN7SKP43-201ENST00000516173 320 ntBASIC3.46□□□□□ -1.86
CCDC144BQ3MJ40 GTF3AP2-201ENST00000557014 266 ntBASIC3.46□□□□□ -1.86
CCDC144BQ3MJ40 AC023824.2-201ENST00000566185 400 ntBASIC3.46□□□□□ -1.86
CCDC144BQ3MJ40 AC090517.1-201ENST00000569307 266 ntBASIC3.46□□□□□ -1.86
CCDC144BQ3MJ40 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC144BQ3MJ40 U2.1-201ENST00000618978 145 ntBASIC3.46□□□□□ -1.86
CCDC144BQ3MJ40 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC144BQ3MJ40 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC144BQ3MJ40 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CCDC144BQ3MJ40 AL035425.3-201ENST00000564206 4996 ntBASIC3.45□□□□□ -1.86
CCDC144BQ3MJ40 RNU6-874P-201ENST00000362390 105 ntBASIC3.45□□□□□ -1.86
CCDC144BQ3MJ40 Y_RNA.526-201ENST00000384572 110 ntBASIC3.45□□□□□ -1.86
CCDC144BQ3MJ40 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC144BQ3MJ40 AC104389.3-201ENST00000445629 235 ntBASIC3.45□□□□□ -1.86
CCDC144BQ3MJ40 GSTA11P-201ENST00000452866 669 ntBASIC3.45□□□□□ -1.86
CCDC144BQ3MJ40 RN7SL20P-201ENST00000488827 297 ntBASIC3.45□□□□□ -1.86
CCDC144BQ3MJ40 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
CCDC144BQ3MJ40 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC144BQ3MJ40 AC005562.2-201ENST00000618264 111 ntBASIC3.45□□□□□ -1.86
CCDC144BQ3MJ40 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC144BQ3MJ40 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC144BQ3MJ40 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 Y_RNA.80-201ENST00000362996 102 ntBASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 SNORA22B-201ENST00000383876 138 ntBASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 RNU6-26P-201ENST00000383985 107 ntBASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 Y_RNA.557-201ENST00000384680 107 ntBASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 RNU6-308P-201ENST00000390957 107 ntBASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 MIR887-201ENST00000401258 79 ntBASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 AL135938.1-201ENST00000443141 297 ntBASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 RNU7-169P-201ENST00000459456 61 ntBASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 RNA5SP76-201ENST00000516277 87 ntBASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 SNORA40.14-201ENST00000516543 86 ntBASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 AP003072.1-201ENST00000531740 145 ntBASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 AC016727.2-201ENST00000603988 621 ntBASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 TCL6_2.1-201ENST00000615162 119 ntBASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 AC005296.1-201ENST00000616145 209 ntBASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 MIR4272-201ENST00000635924 64 ntBASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 ZNF204P-201ENST00000416749 2397 ntBASIC3.44□□□□□ -1.86
CCDC144BQ3MJ40 SNORA51.4-201ENST00000364993 124 ntBASIC3.43□□□□□ -1.86
CCDC144BQ3MJ40 RNU6-546P-201ENST00000383991 107 ntBASIC3.43□□□□□ -1.86
CCDC144BQ3MJ40 AC112220.1-201ENST00000434628 355 ntBASIC3.43□□□□□ -1.86
CCDC144BQ3MJ40 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC144BQ3MJ40 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC144BQ3MJ40 AC103975.1-201ENST00000482506 483 ntBASIC3.43□□□□□ -1.86
CCDC144BQ3MJ40 RNA5SP367-201ENST00000516557 118 ntBASIC3.43□□□□□ -1.86
CCDC144BQ3MJ40 RNU4-77P-201ENST00000516692 156 ntBASIC3.43□□□□□ -1.86
CCDC144BQ3MJ40 MIR4506-201ENST00000584693 77 ntBASIC3.43□□□□□ -1.86
CCDC144BQ3MJ40 AL353621.2-201ENST00000605340 133 ntBASIC3.43□□□□□ -1.86
CCDC144BQ3MJ40 AC007485.1-201ENST00000616755 206 ntBASIC3.43□□□□□ -1.86
CCDC144BQ3MJ40 U4atac.1-201ENST00000618345 95 ntBASIC3.43□□□□□ -1.86
CCDC144BQ3MJ40 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 AC005592.1-201ENST00000566527 1640 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 MIR449A-201ENST00000362113 91 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 Y_RNA.326-201ENST00000365176 113 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 RN7SKP123-201ENST00000410732 291 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 WARS2P1-201ENST00000429678 537 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 AL160004.2-201ENST00000432935 350 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 RPS29P6-201ENST00000438196 145 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 AC096638.1-201ENST00000444678 216 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 AC117440.1-201ENST00000474107 571 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 RNA5SP385-201ENST00000515947 110 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 HSBP1P1-201ENST00000555205 166 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 AC006600.1-201ENST00000572529 153 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 ELOCP29-201ENST00000588193 334 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 AC016925.2-201ENST00000605108 242 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 AC138305.3-201ENST00000624988 240 ntBASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC144BQ3MJ40 RNU6-222P-201ENST00000362438 107 ntBASIC3.41□□□□□ -1.86
CCDC144BQ3MJ40 Y_RNA.148-201ENST00000363557 117 ntBASIC3.41□□□□□ -1.86
CCDC144BQ3MJ40 RNU6-944P-201ENST00000364023 107 ntBASIC3.41□□□□□ -1.86
CCDC144BQ3MJ40 SNORA33.2-201ENST00000365413 134 ntBASIC3.41□□□□□ -1.86
CCDC144BQ3MJ40 MIR10B-201ENST00000385011 110 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms