Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.45□□□□□ -2.02
USP41Q3LFD5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.45□□□□□ -2.02
USP41Q3LFD5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.45□□□□□ -2.02
USP41Q3LFD5 AL450472.1-202ENST00000637286 180 ntBASIC2.45□□□□□ -2.02
USP41Q3LFD5 MTND5P9-201ENST00000503854 1755 ntBASIC2.45□□□□□ -2.02
USP41Q3LFD5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.45□□□□□ -2.02
USP41Q3LFD5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USP41Q3LFD5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
USP41Q3LFD5 Y_RNA.67-201ENST00000362870 100 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 RNU4-73P-201ENST00000363164 141 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 RNU6-596P-201ENST00000365395 98 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 SNORA29-201ENST00000384183 140 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 RNU6-1297P-201ENST00000384415 104 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 Y_RNA.533-201ENST00000384596 114 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 RNU6-1072P-201ENST00000384703 107 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 RNU6-443P-201ENST00000384780 107 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 SNORA26.3-201ENST00000391119 136 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 RNU6-174P-201ENST00000410406 106 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 RNA5SP494-201ENST00000410653 129 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 HMGB3P2-201ENST00000411913 584 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 EIF4EP2-201ENST00000422816 654 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 RPS15AP28-201ENST00000435088 386 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 CYP2C59P-201ENST00000457790 269 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 snoU13.6-201ENST00000458785 104 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 AC005741.1-201ENST00000511094 432 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 Y_RNA.675-201ENST00000516389 149 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.44□□□□□ -2.02
USP41Q3LFD5 APOOP3-201ENST00000536787 586 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 MIR3923-201ENST00000579521 83 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.44□□□□□ -2.02
USP41Q3LFD5 Z98751.3-201ENST00000604447 521 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.44□□□□□ -2.02
USP41Q3LFD5 AC009318.2-201ENST00000610917 651 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 MTND4LP32-201ENST00000636111 270 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 AL669831.3-213ENST00000636676 183 ntBASIC2.44□□□□□ -2.02
USP41Q3LFD5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
USP41Q3LFD5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.44□□□□□ -2.02
USP41Q3LFD5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
USP41Q3LFD5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USP41Q3LFD5 RNU4-15P-201ENST00000362613 141 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 Y_RNA.58-201ENST00000362807 102 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 Y_RNA.154-201ENST00000363624 102 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 RNY3P1-201ENST00000365085 102 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 RNY3-201ENST00000365484 102 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.43□□□□□ -2.02
USP41Q3LFD5 Y_RNA.404-201ENST00000383978 102 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 Y_RNA.490-201ENST00000384413 102 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 RNU6-1274P-201ENST00000384557 107 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 RNU2-41P-201ENST00000410991 178 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.43□□□□□ -2.02
USP41Q3LFD5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.43□□□□□ -2.02
USP41Q3LFD5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.43□□□□□ -2.02
USP41Q3LFD5 AL161788.1-201ENST00000441805 169 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 AC079354.2-201ENST00000453523 154 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 RNU7-26P-201ENST00000458980 63 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 AC145146.1-201ENST00000496370 254 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 RNU6-567P-201ENST00000516746 107 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 CBX3P7-201ENST00000532876 502 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 MIR5690-201ENST00000583739 73 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 MIR4795-201ENST00000584182 89 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 AL355297.2-201ENST00000604792 129 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 AC008121.3-201ENST00000618726 433 ntBASIC2.43□□□□□ -2.02
USP41Q3LFD5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.42□□□□□ -2.02
USP41Q3LFD5 Y_RNA.259-201ENST00000364619 101 ntBASIC2.42□□□□□ -2.02
USP41Q3LFD5 RNU6-331P-201ENST00000384724 107 ntBASIC2.42□□□□□ -2.02
USP41Q3LFD5 MIR29B2-201ENST00000385055 81 ntBASIC2.42□□□□□ -2.02
USP41Q3LFD5 AC012306.1-201ENST00000423267 114 ntBASIC2.42□□□□□ -2.02
USP41Q3LFD5 RPL23AP50-201ENST00000434149 455 ntBASIC2.42□□□□□ -2.02
USP41Q3LFD5 AC018634.1-201ENST00000437554 401 ntBASIC2.42□□□□□ -2.02
USP41Q3LFD5 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.42□□□□□ -2.02
USP41Q3LFD5 RNU1-104P-201ENST00000517280 175 ntBASIC2.42□□□□□ -2.02
USP41Q3LFD5 CBX3P8-201ENST00000532412 525 ntBASIC2.42□□□□□ -2.02
USP41Q3LFD5 AC016256.1-201ENST00000547971 354 ntBASIC2.42□□□□□ -2.02
USP41Q3LFD5 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.42□□□□□ -2.02
USP41Q3LFD5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.42□□□□□ -2.02
USP41Q3LFD5 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.42□□□□□ -2.02
USP41Q3LFD5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.42□□□□□ -2.02
USP41Q3LFD5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
USP41Q3LFD5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
USP41Q3LFD5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
USP41Q3LFD5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.41□□□□□ -2.02
USP41Q3LFD5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
USP41Q3LFD5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
USP41Q3LFD5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USP41Q3LFD5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USP41Q3LFD5 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.41□□□□□ -2.02
USP41Q3LFD5 MIR21-201ENST00000362134 72 ntBASIC2.41□□□□□ -2.02
USP41Q3LFD5 RNU5B-2P-201ENST00000363036 113 ntBASIC2.41□□□□□ -2.02
USP41Q3LFD5 RNU6-1188P-201ENST00000363795 107 ntBASIC2.41□□□□□ -2.02
USP41Q3LFD5 SNORA67.1-201ENST00000364749 141 ntBASIC2.41□□□□□ -2.02
USP41Q3LFD5 RNA5SP240-201ENST00000365355 128 ntBASIC2.41□□□□□ -2.02
USP41Q3LFD5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
USP41Q3LFD5 MIR208B-201ENST00000401172 77 ntBASIC2.41□□□□□ -2.02
USP41Q3LFD5 AC003685.2-201ENST00000422795 395 ntBASIC2.41□□□□□ -2.02
USP41Q3LFD5 USMG5P1-201ENST00000425964 177 ntBASIC2.41□□□□□ -2.02
USP41Q3LFD5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.41□□□□□ -2.02
USP41Q3LFD5 RPL30P15-201ENST00000457129 321 ntBASIC2.41□□□□□ -2.02
USP41Q3LFD5 Y_RNA.632-201ENST00000459189 102 ntBASIC2.41□□□□□ -2.02
USP41Q3LFD5 RPL23AP75-201ENST00000491601 451 ntBASIC2.41□□□□□ -2.02
USP41Q3LFD5 AF186996.7-201ENST00000492781 209 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms