Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 YWHAEP4-201ENST00000505390 198 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.46□□□□□ -2.18
RFX4Q33E94 Y_RNA.665-201ENST00000516177 98 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 RNA5SP490-201ENST00000517141 136 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 SCOCP1-201ENST00000554676 349 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 AC245505.1-201ENST00000556398 224 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 MIR3923-201ENST00000579521 83 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 CTHRC1P1-201ENST00000605383 469 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 AP000654.2-201ENST00000605633 586 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 AC097065.2-201ENST00000608159 533 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.46□□□□□ -2.18
RFX4Q33E94 AC099654.12-201ENST00000639868 649 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 AC009541.1-201ENST00000438279 2662 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
RFX4Q33E94 AL356292.1-201ENST00000283110 373 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 MIR126-201ENST00000362291 85 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 RNU4-40P-201ENST00000364351 143 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 Y_RNA.332-201ENST00000365271 113 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
RFX4Q33E94 RNA5SP465-201ENST00000391195 109 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
RFX4Q33E94 RNA5SP501-201ENST00000410990 112 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
RFX4Q33E94 MTCO1P20-201ENST00000425366 358 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 AL121890.1-201ENST00000435457 205 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.45□□□□□ -2.18
RFX4Q33E94 SEPT14P3-201ENST00000439401 183 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 AL732372.2-207ENST00000445840 183 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.45□□□□□ -2.18
RFX4Q33E94 SEPT14P2-201ENST00000453405 183 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 AMD1P1-201ENST00000457220 922 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 snoU13.6-201ENST00000458785 104 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 RPL9P9-202ENST00000466501 579 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 SEPT14P4-201ENST00000513445 186 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 RNU6-970P-201ENST00000516312 107 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 RNU6-506P-201ENST00000516553 94 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 RNU6-1332P-201ENST00000516666 104 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 RNU6-295P-201ENST00000516901 104 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 FO082796.1-201ENST00000523795 183 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 AC021231.3-201ENST00000558497 370 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 MIR3169-201ENST00000578032 83 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 MIR4255-201ENST00000579351 72 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 AL158827.2-201ENST00000602494 330 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 AL162413.1-201ENST00000603198 110 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 MIR502-201ENST00000606349 86 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 AC009994.1-201ENST00000606889 253 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 AC005520.5-201ENST00000613926 164 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 AL590240.4-201ENST00000616908 390 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 AC022513.1-201ENST00000624512 117 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
RFX4Q33E94 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
RFX4Q33E94 AL691447.3-201ENST00000635020 330 ntBASIC1.45□□□□□ -2.18
RFX4Q33E94 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
RFX4Q33E94 RNU6-227P-201ENST00000362865 103 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 U3.9-201ENST00000363823 204 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 Y_RNA.256-201ENST00000364594 104 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 RNU4-56P-201ENST00000364700 142 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 AL033519.2-201ENST00000403958 392 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 RNU6-325P-201ENST00000411132 105 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 AC010095.1-201ENST00000443543 144 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 AC245102.2-201ENST00000448956 180 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.44□□□□□ -2.18
RFX4Q33E94 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.44□□□□□ -2.18
RFX4Q33E94 HMGN2P26-201ENST00000463169 339 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.44□□□□□ -2.18
RFX4Q33E94 Y_RNA.675-201ENST00000516389 149 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 RNU6-1098P-201ENST00000516772 96 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.44□□□□□ -2.18
RFX4Q33E94 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 DEFB131C-201ENST00000528817 165 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 AC087441.2-201ENST00000529141 262 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.44□□□□□ -2.18
RFX4Q33E94 EIF4A1P12-201ENST00000551910 141 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.44□□□□□ -2.18
RFX4Q33E94 CYP4A27P-201ENST00000567218 190 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.44□□□□□ -2.18
RFX4Q33E94 AC116312.1-201ENST00000606841 314 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 AC004492.1-201ENST00000607036 742 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.44□□□□□ -2.18
RFX4Q33E94 MIR8081-201ENST00000611533 95 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 AC015540.1-201ENST00000615828 501 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 FER-210ENST00000628534 558 ntTSL 5 BASIC1.44□□□□□ -2.18
RFX4Q33E94 MIR1321-201ENST00000637766 79 ntBASIC1.44□□□□□ -2.18
RFX4Q33E94 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.44□□□□□ -2.18
RFX4Q33E94 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
RFX4Q33E94 RNU6-254P-201ENST00000363377 107 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 RNY3P3-201ENST00000363816 102 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 RNU1-42P-201ENST00000364033 160 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 RNA5SP493-201ENST00000364115 91 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
RFX4Q33E94 MIR208B-201ENST00000401172 77 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 AL590002.1-201ENST00000406554 418 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 AL357139.1-201ENST00000407792 426 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 RN7SKP51-201ENST00000410781 304 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 ARL5AP1-201ENST00000418991 388 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 AL358453.1-201ENST00000422522 250 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 AC012306.1-201ENST00000423267 114 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 USP9YP28-201ENST00000435142 589 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 RNU1-98P-201ENST00000458992 160 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms