Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 NDUFA5P4-201ENST00000436704 385 ntBASIC0.75□□□□□ -2.29
USF2Q15853 AL031274.1-201ENST00000450334 232 ntBASIC0.75□□□□□ -2.29
USF2Q15853 RPL39P38-201ENST00000467018 153 ntBASIC0.75□□□□□ -2.29
USF2Q15853 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.75□□□□□ -2.29
USF2Q15853 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.75□□□□□ -2.29
USF2Q15853 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.75□□□□□ -2.29
USF2Q15853 SNORA31.4-201ENST00000516049 129 ntBASIC0.75□□□□□ -2.29
USF2Q15853 RNA5SP168-201ENST00000516642 112 ntBASIC0.75□□□□□ -2.29
USF2Q15853 MIR4742-201ENST00000581069 85 ntBASIC0.75□□□□□ -2.29
USF2Q15853 AL929325.1-201ENST00000603096 117 ntBASIC0.75□□□□□ -2.29
USF2Q15853 AC136443.5-201ENST00000603741 370 ntBASIC0.75□□□□□ -2.29
USF2Q15853 AC018714.1-201ENST00000605028 208 ntBASIC0.75□□□□□ -2.29
USF2Q15853 AC080078.3-201ENST00000605407 463 ntBASIC0.75□□□□□ -2.29
USF2Q15853 AC009994.1-201ENST00000606889 253 ntBASIC0.75□□□□□ -2.29
USF2Q15853 U6.114-201ENST00000636407 96 ntBASIC0.75□□□□□ -2.29
USF2Q15853 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.74□□□□□ -2.29
USF2Q15853 AL391994.1-201ENST00000254724 282 ntBASIC0.74□□□□□ -2.29
USF2Q15853 RNU4-79P-201ENST00000362764 141 ntBASIC0.74□□□□□ -2.29
USF2Q15853 RNU6-1287P-201ENST00000362914 107 ntBASIC0.74□□□□□ -2.29
USF2Q15853 RNU6-1060P-201ENST00000384664 107 ntBASIC0.74□□□□□ -2.29
USF2Q15853 RNA5SP109-201ENST00000391010 116 ntBASIC0.74□□□□□ -2.29
USF2Q15853 RPL21P1-201ENST00000399532 476 ntBASIC0.74□□□□□ -2.29
USF2Q15853 AC073614.1-201ENST00000438690 650 ntBASIC0.74□□□□□ -2.29
USF2Q15853 AC048334.1-201ENST00000477975 159 ntBASIC0.74□□□□□ -2.29
USF2Q15853 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.74□□□□□ -2.29
USF2Q15853 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.74□□□□□ -2.29
USF2Q15853 AK3P2-201ENST00000507976 429 ntBASIC0.74□□□□□ -2.29
USF2Q15853 SCARNA24.1-201ENST00000516465 137 ntBASIC0.74□□□□□ -2.29
USF2Q15853 AC090142.3-201ENST00000519012 385 ntBASIC0.74□□□□□ -2.29
USF2Q15853 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.74□□□□□ -2.29
USF2Q15853 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.74□□□□□ -2.29
USF2Q15853 AC025423.5-201ENST00000550230 219 ntBASIC0.74□□□□□ -2.29
USF2Q15853 MIR4753-201ENST00000585119 83 ntBASIC0.74□□□□□ -2.29
USF2Q15853 AP000811.1-201ENST00000603803 651 ntBASIC0.74□□□□□ -2.29
USF2Q15853 Z99289.3-201ENST00000605586 594 ntBASIC0.74□□□□□ -2.29
USF2Q15853 AC008945.2-201ENST00000606056 604 ntBASIC0.74□□□□□ -2.29
USF2Q15853 AC021506.2-201ENST00000612354 169 ntBASIC0.74□□□□□ -2.29
USF2Q15853 AC106800.4-201ENST00000614905 153 ntBASIC0.74□□□□□ -2.29
USF2Q15853 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.74□□□□□ -2.29
USF2Q15853 AL450472.1-202ENST00000637286 180 ntBASIC0.74□□□□□ -2.29
USF2Q15853 AC027514.1-201ENST00000588561 1603 ntBASIC0.74□□□□□ -2.29
USF2Q15853 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
USF2Q15853 Y_RNA.124-201ENST00000363339 93 ntBASIC0.73□□□□□ -2.29
USF2Q15853 RNU6-501P-201ENST00000364072 100 ntBASIC0.73□□□□□ -2.29
USF2Q15853 SNORA20.2-201ENST00000383922 131 ntBASIC0.73□□□□□ -2.29
USF2Q15853 RNU6-550P-201ENST00000391057 101 ntBASIC0.73□□□□□ -2.29
USF2Q15853 AC090960.1-201ENST00000421072 306 ntBASIC0.73□□□□□ -2.29
USF2Q15853 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.73□□□□□ -2.29
USF2Q15853 RPL23AP95-201ENST00000426806 265 ntBASIC0.73□□□□□ -2.29
USF2Q15853 RAB28P5-201ENST00000427490 651 ntBASIC0.73□□□□□ -2.29
USF2Q15853 HSFY7P-201ENST00000432672 318 ntBASIC0.73□□□□□ -2.29
USF2Q15853 HSFY8P-201ENST00000437934 318 ntBASIC0.73□□□□□ -2.29
USF2Q15853 AC013470.1-201ENST00000453438 462 ntBASIC0.73□□□□□ -2.29
USF2Q15853 AC136628.3-201ENST00000521868 290 ntBASIC0.73□□□□□ -2.29
USF2Q15853 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.73□□□□□ -2.29
USF2Q15853 AC103996.1-201ENST00000555468 102 ntBASIC0.73□□□□□ -2.29
USF2Q15853 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.73□□□□□ -2.29
USF2Q15853 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
USF2Q15853 VN1R107P-201ENST00000601784 209 ntBASIC0.73□□□□□ -2.29
USF2Q15853 AC068790.6-201ENST00000602558 258 ntBASIC0.73□□□□□ -2.29
USF2Q15853 AL078603.1-201ENST00000603824 313 ntBASIC0.73□□□□□ -2.29
USF2Q15853 AC091805.2-201ENST00000603848 235 ntBASIC0.73□□□□□ -2.29
USF2Q15853 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.73□□□□□ -2.29
USF2Q15853 AC008163.1-202ENST00000636004 2889 ntBASIC0.73□□□□□ -2.29
USF2Q15853 OR4G1P-203ENST00000641984 1631 ntBASIC0.72□□□□□ -2.29
USF2Q15853 snoU2-30.2-201ENST00000362805 70 ntBASIC0.72□□□□□ -2.29
USF2Q15853 Y_RNA.116-201ENST00000363292 103 ntBASIC0.72□□□□□ -2.29
USF2Q15853 Y_RNA.269-201ENST00000364685 89 ntBASIC0.72□□□□□ -2.29
USF2Q15853 RNU6-1080P-201ENST00000383982 107 ntBASIC0.72□□□□□ -2.29
USF2Q15853 MIR608-201ENST00000384820 100 ntBASIC0.72□□□□□ -2.29
USF2Q15853 MIR518E-201ENST00000385252 88 ntBASIC0.72□□□□□ -2.29
USF2Q15853 RNU6-1093P-201ENST00000391194 107 ntBASIC0.72□□□□□ -2.29
USF2Q15853 MIR300-201ENST00000401138 83 ntBASIC0.72□□□□□ -2.29
USF2Q15853 RPS29P13-201ENST00000402041 169 ntBASIC0.72□□□□□ -2.29
USF2Q15853 MIR1283-1-201ENST00000408494 87 ntBASIC0.72□□□□□ -2.29
USF2Q15853 AC011233.1-201ENST00000422812 283 ntBASIC0.72□□□□□ -2.29
USF2Q15853 AC010154.1-201ENST00000425857 269 ntBASIC0.72□□□□□ -2.29
USF2Q15853 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.72□□□□□ -2.29
USF2Q15853 AC002429.1-201ENST00000437672 148 ntBASIC0.72□□□□□ -2.29
USF2Q15853 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.72□□□□□ -2.29
USF2Q15853 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.72□□□□□ -2.29
USF2Q15853 AC016717.1-201ENST00000448918 286 ntBASIC0.72□□□□□ -2.29
USF2Q15853 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
USF2Q15853 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.72□□□□□ -2.29
USF2Q15853 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.72□□□□□ -2.29
USF2Q15853 Y_RNA.673-201ENST00000516306 88 ntBASIC0.72□□□□□ -2.29
USF2Q15853 RNU2-34P-201ENST00000516534 121 ntBASIC0.72□□□□□ -2.29
USF2Q15853 RN7SKP49-201ENST00000516675 260 ntBASIC0.72□□□□□ -2.29
USF2Q15853 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.72□□□□□ -2.29
USF2Q15853 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.72□□□□□ -2.29
USF2Q15853 AC008015.1-201ENST00000555505 465 ntBASIC0.72□□□□□ -2.29
USF2Q15853 MTND4P33-201ENST00000556706 766 ntBASIC0.72□□□□□ -2.29
USF2Q15853 PCMTD1P2-201ENST00000565017 355 ntBASIC0.72□□□□□ -2.29
USF2Q15853 TPRKBP2-201ENST00000565969 475 ntBASIC0.72□□□□□ -2.29
USF2Q15853 AC016727.2-201ENST00000603988 621 ntBASIC0.72□□□□□ -2.29
USF2Q15853 AC064872.1-201ENST00000604823 1072 ntBASIC0.72□□□□□ -2.29
USF2Q15853 AC064807.4-201ENST00000607201 407 ntBASIC0.72□□□□□ -2.29
USF2Q15853 Y_RNA.122-201ENST00000363331 96 ntBASIC0.71□□□□□ -2.3
USF2Q15853 SNORD114-22-201ENST00000365423 72 ntBASIC0.71□□□□□ -2.3
USF2Q15853 RNA5SP323-201ENST00000391094 133 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms