Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 PCNPP5-201ENST00000452246 481 ntBASIC3.17□□□□□ -1.9
SF3B3Q15393 AC006026.2-201ENST00000457376 180 ntBASIC3.17□□□□□ -1.9
SF3B3Q15393 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.17□□□□□ -1.9
SF3B3Q15393 RNU6-408P-201ENST00000515910 100 ntBASIC3.17□□□□□ -1.9
SF3B3Q15393 SNORA25.11-201ENST00000515935 105 ntBASIC3.17□□□□□ -1.9
SF3B3Q15393 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.17□□□□□ -1.9
SF3B3Q15393 AC090517.1-201ENST00000569307 266 ntBASIC3.17□□□□□ -1.9
SF3B3Q15393 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.17□□□□□ -1.9
SF3B3Q15393 AC125232.2-201ENST00000592457 143 ntBASIC3.17□□□□□ -1.9
SF3B3Q15393 MTND4LP5-201ENST00000605152 292 ntBASIC3.17□□□□□ -1.9
SF3B3Q15393 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.17□□□□□ -1.9
SF3B3Q15393 AC241585.2-209ENST00000638217 143 ntBASIC3.17□□□□□ -1.9
SF3B3Q15393 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SF3B3Q15393 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SF3B3Q15393 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SF3B3Q15393 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SF3B3Q15393 RNU6-527P-201ENST00000363425 104 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 Y_RNA.222-201ENST00000364264 102 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 RNU6-1180P-201ENST00000364935 107 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 SNORA51.4-201ENST00000364993 124 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 Y_RNA.405-201ENST00000383979 100 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 Y_RNA.451-201ENST00000384200 100 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 Y_RNA.476-201ENST00000384347 108 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 Y_RNA.524-201ENST00000384564 100 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 Y_RNA.561-201ENST00000384694 100 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 MIR628-201ENST00000385229 95 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 MIR190B-201ENST00000401119 79 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 NDUFS5P4-201ENST00000412983 318 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 SRIP1-201ENST00000489235 288 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 RPL23AP49-201ENST00000492925 468 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 RPS27AP10-201ENST00000496103 208 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 SEM1P1-201ENST00000506694 209 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.16□□□□□ -1.9
SF3B3Q15393 AL390123.1-201ENST00000603216 237 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.16□□□□□ -1.9
SF3B3Q15393 AC097372.5-201ENST00000623665 376 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 AC026241.1-201ENST00000517873 2142 ntBASIC3.16□□□□□ -1.9
SF3B3Q15393 AC093010.3-201ENST00000570269 15214 ntBASIC3.15□□□□□ -1.9
SF3B3Q15393 ZNF658B-202ENST00000615961 3375 ntBASIC3.15□□□□□ -1.9
SF3B3Q15393 Y_RNA.26-201ENST00000362539 101 ntBASIC3.15□□□□□ -1.91
SF3B3Q15393 RNU1-100P-201ENST00000365255 165 ntBASIC3.15□□□□□ -1.91
SF3B3Q15393 RNU6-708P-201ENST00000384217 107 ntBASIC3.15□□□□□ -1.91
SF3B3Q15393 RNU6-713P-201ENST00000384761 107 ntBASIC3.15□□□□□ -1.91
SF3B3Q15393 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.15□□□□□ -1.91
SF3B3Q15393 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.15□□□□□ -1.91
SF3B3Q15393 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.15□□□□□ -1.91
SF3B3Q15393 AC243964.1-201ENST00000441814 261 ntBASIC3.15□□□□□ -1.91
SF3B3Q15393 AC124916.1-201ENST00000444020 547 ntBASIC3.15□□□□□ -1.91
SF3B3Q15393 AL513124.1-201ENST00000450410 614 ntBASIC3.15□□□□□ -1.91
SF3B3Q15393 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.15□□□□□ -1.91
SF3B3Q15393 AC103975.1-201ENST00000482506 483 ntBASIC3.15□□□□□ -1.91
SF3B3Q15393 RNU6-928P-201ENST00000516876 104 ntBASIC3.15□□□□□ -1.91
SF3B3Q15393 AC034114.1-201ENST00000520293 285 ntBASIC3.15□□□□□ -1.91
SF3B3Q15393 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.15□□□□□ -1.91
SF3B3Q15393 AC104984.5-201ENST00000586878 94 ntBASIC3.15□□□□□ -1.91
SF3B3Q15393 RPS29P30-201ENST00000600975 111 ntBASIC3.15□□□□□ -1.91
SF3B3Q15393 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.15□□□□□ -1.91
SF3B3Q15393 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SF3B3Q15393 RNU6-379P-201ENST00000363813 104 ntBASIC3.14□□□□□ -1.91
SF3B3Q15393 RNU6-770P-201ENST00000363929 105 ntBASIC3.14□□□□□ -1.91
SF3B3Q15393 Y_RNA.307-201ENST00000365022 117 ntBASIC3.14□□□□□ -1.91
SF3B3Q15393 RNU6-806P-201ENST00000365147 105 ntBASIC3.14□□□□□ -1.91
SF3B3Q15393 AL358453.1-201ENST00000422522 250 ntBASIC3.14□□□□□ -1.91
SF3B3Q15393 AL591043.1-201ENST00000432461 424 ntBASIC3.14□□□□□ -1.91
SF3B3Q15393 RPEP5-201ENST00000441137 268 ntBASIC3.14□□□□□ -1.91
SF3B3Q15393 AL031659.1-201ENST00000447075 539 ntBASIC3.14□□□□□ -1.91
SF3B3Q15393 RNY3P15-201ENST00000516297 97 ntBASIC3.14□□□□□ -1.91
SF3B3Q15393 RNU6-897P-201ENST00000517135 105 ntBASIC3.14□□□□□ -1.91
SF3B3Q15393 AC023157.2-201ENST00000540596 141 ntBASIC3.14□□□□□ -1.91
SF3B3Q15393 CR383656.8-201ENST00000549046 145 ntBASIC3.14□□□□□ -1.91
SF3B3Q15393 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.14□□□□□ -1.91
SF3B3Q15393 RPL23AP88-201ENST00000605759 454 ntBASIC3.14□□□□□ -1.91
SF3B3Q15393 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.14□□□□□ -1.91
SF3B3Q15393 AC009541.1-201ENST00000438279 2662 ntBASIC3.14□□□□□ -1.91
SF3B3Q15393 AC010680.1-201ENST00000590024 3590 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.13□□□□□ -1.91
SF3B3Q15393 Y_RNA.27-201ENST00000362540 103 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 Y_RNA.64-201ENST00000362845 102 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 RNU1-109P-201ENST00000383960 147 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 RNU6-198P-201ENST00000384258 104 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 Y_RNA.461-201ENST00000384263 103 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 RNU6-611P-201ENST00000384276 104 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 Y_RNA.471-201ENST00000384312 102 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 MIR181B1-201ENST00000385240 110 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 MT-TW-201ENST00000387382 68 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 RNU6-847P-201ENST00000411115 108 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 AC099548.1-201ENST00000421443 426 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 USP9YP16-201ENST00000430287 407 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 USP9YP23-201ENST00000455085 407 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 RPS29P20-201ENST00000489592 171 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 AC104564.1-201ENST00000493028 407 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 RNU7-175P-201ENST00000515915 61 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 RNU6-1143P-201ENST00000516125 104 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 RNU6-397P-201ENST00000516226 104 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 RNU2-53P-201ENST00000516257 147 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 MRPS36P4-201ENST00000534436 298 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.13□□□□□ -1.91
SF3B3Q15393 MIR6715A-201ENST00000615929 79 ntBASIC3.13□□□□□ -1.91
SF3B3Q15393 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SF3B3Q15393 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms