Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AL049830.2-201ENST00000480072 201 ntBASIC3.22□□□□□ -1.89
IRF9Q00978 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.22□□□□□ -1.89
IRF9Q00978 AC107222.1-201ENST00000510899 637 ntBASIC3.22□□□□□ -1.89
IRF9Q00978 Y_RNA.673-201ENST00000516306 88 ntBASIC3.22□□□□□ -1.89
IRF9Q00978 SCARNA11.3-201ENST00000517276 130 ntBASIC3.22□□□□□ -1.89
IRF9Q00978 AC027176.1-201ENST00000560204 514 ntBASIC3.22□□□□□ -1.89
IRF9Q00978 AC233702.2-202ENST00000562547 291 ntBASIC3.22□□□□□ -1.89
IRF9Q00978 MIR5047-201ENST00000579212 100 ntBASIC3.22□□□□□ -1.89
IRF9Q00978 AL670379.2-201ENST00000604983 252 ntBASIC3.22□□□□□ -1.89
IRF9Q00978 SNORD113-5-201ENST00000607261 78 ntBASIC3.22□□□□□ -1.89
IRF9Q00978 MIR8058-201ENST00000615737 89 ntBASIC3.22□□□□□ -1.89
IRF9Q00978 AC084757.4-201ENST00000616350 526 ntBASIC3.22□□□□□ -1.89
IRF9Q00978 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.22□□□□□ -1.89
IRF9Q00978 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
IRF9Q00978 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.22□□□□□ -1.89
IRF9Q00978 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.22□□□□□ -1.89
IRF9Q00978 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.22□□□□□ -1.89
IRF9Q00978 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
IRF9Q00978 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.21□□□□□ -1.9
IRF9Q00978 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
IRF9Q00978 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
IRF9Q00978 SNORA63.1-201ENST00000362493 131 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 RNU6-486P-201ENST00000363116 107 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 SNORD46.1-201ENST00000364139 104 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 Y_RNA.230-201ENST00000364348 109 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 SNORA18.3-201ENST00000384122 132 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 Y_RNA.570-201ENST00000384750 101 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 MIR218-2-201ENST00000385006 110 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 AL512633.1-201ENST00000399931 655 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 SEPT14P8-201ENST00000508026 178 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.21□□□□□ -1.9
IRF9Q00978 AC074133.1-201ENST00000515696 183 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 RNA5SP217-201ENST00000515959 91 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 RNU7-110P-201ENST00000516891 62 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.21□□□□□ -1.9
IRF9Q00978 MIR4276-201ENST00000584832 70 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 AC011373.1-201ENST00000607270 237 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 U3.45-201ENST00000607547 219 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 AC019176.2-201ENST00000611579 315 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
IRF9Q00978 AC005562.2-201ENST00000618264 111 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 AC018692.3-201ENST00000623929 123 ntBASIC3.21□□□□□ -1.9
IRF9Q00978 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.21□□□□□ -1.9
IRF9Q00978 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
IRF9Q00978 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
IRF9Q00978 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
IRF9Q00978 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
IRF9Q00978 Y_RNA.416-201ENST00000384014 113 ntBASIC3.2□□□□□ -1.9
IRF9Q00978 RNU6-21P-201ENST00000384710 107 ntBASIC3.2□□□□□ -1.9
IRF9Q00978 MIR490-201ENST00000384865 128 ntBASIC3.2□□□□□ -1.9
IRF9Q00978 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
IRF9Q00978 RNU4-30P-201ENST00000410245 143 ntBASIC3.2□□□□□ -1.9
IRF9Q00978 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.2□□□□□ -1.9
IRF9Q00978 AL390729.2-201ENST00000416137 156 ntBASIC3.2□□□□□ -1.9
IRF9Q00978 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.2□□□□□ -1.9
IRF9Q00978 ARF4P2-201ENST00000430209 526 ntBASIC3.2□□□□□ -1.9
IRF9Q00978 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.2□□□□□ -1.9
IRF9Q00978 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.2□□□□□ -1.9
IRF9Q00978 IFNA11P-201ENST00000446352 526 ntBASIC3.2□□□□□ -1.9
IRF9Q00978 PRSS3P4-201ENST00000453323 162 ntBASIC3.2□□□□□ -1.9
IRF9Q00978 RPL31P41-201ENST00000477967 372 ntBASIC3.2□□□□□ -1.9
IRF9Q00978 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.2□□□□□ -1.9
IRF9Q00978 RPL30P11-203ENST00000598995 310 ntBASIC3.2□□□□□ -1.9
IRF9Q00978 AC107294.3-201ENST00000609211 526 ntBASIC3.2□□□□□ -1.9
IRF9Q00978 AC127459.3-201ENST00000624328 466 ntBASIC3.2□□□□□ -1.9
IRF9Q00978 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
IRF9Q00978 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.2□□□□□ -1.9
IRF9Q00978 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
IRF9Q00978 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
IRF9Q00978 MIR208A-201ENST00000362287 71 ntBASIC3.19□□□□□ -1.9
IRF9Q00978 RNU6-727P-201ENST00000363592 107 ntBASIC3.19□□□□□ -1.9
IRF9Q00978 RNU6-1175P-201ENST00000365200 107 ntBASIC3.19□□□□□ -1.9
IRF9Q00978 Y_RNA.352-201ENST00000365439 102 ntBASIC3.19□□□□□ -1.9
IRF9Q00978 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.19□□□□□ -1.9
IRF9Q00978 AC027124.2-201ENST00000428249 105 ntBASIC3.19□□□□□ -1.9
IRF9Q00978 RNU6-625P-201ENST00000459412 107 ntBASIC3.19□□□□□ -1.9
IRF9Q00978 snoU13.22-201ENST00000459428 104 ntBASIC3.19□□□□□ -1.9
IRF9Q00978 AC091179.1-201ENST00000461606 579 ntBASIC3.19□□□□□ -1.9
IRF9Q00978 SCARNA24.2-201ENST00000516968 130 ntBASIC3.19□□□□□ -1.9
IRF9Q00978 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.19□□□□□ -1.9
IRF9Q00978 AC018448.1-201ENST00000552843 316 ntBASIC3.19□□□□□ -1.9
IRF9Q00978 MIR3186-201ENST00000577404 85 ntBASIC3.19□□□□□ -1.9
IRF9Q00978 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.19□□□□□ -1.9
IRF9Q00978 AC005176.2-201ENST00000596933 147 ntBASIC3.19□□□□□ -1.9
IRF9Q00978 TCL6_2.1-201ENST00000615162 119 ntBASIC3.19□□□□□ -1.9
IRF9Q00978 AC141273.2-201ENST00000618989 130 ntBASIC3.19□□□□□ -1.9
IRF9Q00978 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
IRF9Q00978 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
IRF9Q00978 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.19□□□□□ -1.9
IRF9Q00978 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
IRF9Q00978 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
IRF9Q00978 Y_RNA.20-201ENST00000362479 113 ntBASIC3.18□□□□□ -1.9
IRF9Q00978 RNA5SP387-201ENST00000364226 106 ntBASIC3.18□□□□□ -1.9
IRF9Q00978 Y_RNA.286-201ENST00000364813 102 ntBASIC3.18□□□□□ -1.9
IRF9Q00978 SNORA70.4-201ENST00000365509 134 ntBASIC3.18□□□□□ -1.9
IRF9Q00978 RPL32P35-201ENST00000415214 394 ntBASIC3.18□□□□□ -1.9
IRF9Q00978 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.18□□□□□ -1.9
IRF9Q00978 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.18□□□□□ -1.9
IRF9Q00978 AC004386.2-201ENST00000441858 148 ntBASIC3.18□□□□□ -1.9
IRF9Q00978 RN7SL330P-201ENST00000469709 307 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms