Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 RNU11-5P-201ENST00000391216 129 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 AP000275.1-201ENST00000411943 390 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 AL356583.2-201ENST00000426536 280 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 SNAP23P1-201ENST00000433229 246 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 AC104850.1-201ENST00000435940 476 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.68□□□□□ -2.3
HOXC5Q00444 GTF2IP13-201ENST00000438487 386 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 AL512286.1-201ENST00000439244 400 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.68□□□□□ -2.3
HOXC5Q00444 RPS23P5-201ENST00000495419 428 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 MTND3P3-201ENST00000505004 126 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.68□□□□□ -2.3
HOXC5Q00444 MTATP6P9-201ENST00000515039 680 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 Y_RNA.672-201ENST00000516289 104 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 SCARNA16.2-201ENST00000516520 172 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 RNU6-165P-201ENST00000517170 99 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 AC109479.2-201ENST00000517842 174 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.68□□□□□ -2.3
HOXC5Q00444 AC011604.1-201ENST00000545978 196 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 AC103996.1-201ENST00000555468 102 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 CYP4A27P-201ENST00000567218 190 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 AC112191.3-201ENST00000604371 277 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 AL021879.1-201ENST00000611756 288 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 AC009878.1-201ENST00000621819 340 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 U6.114-201ENST00000636407 96 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 AL450472.1-202ENST00000637286 180 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 AC006927.3-201ENST00000638789 384 ntBASIC0.68□□□□□ -2.3
HOXC5Q00444 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.68□□□□□ -2.3
HOXC5Q00444 RNU6-1287P-201ENST00000362914 107 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 Y_RNA.367-201ENST00000365544 101 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 RNU6-1060P-201ENST00000384664 107 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.67□□□□□ -2.3
HOXC5Q00444 HSFY7P-201ENST00000432672 318 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 HSFY8P-201ENST00000437934 318 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.67□□□□□ -2.3
HOXC5Q00444 TAF9P1-201ENST00000445421 515 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.67□□□□□ -2.3
HOXC5Q00444 MTCYBP1-201ENST00000454315 1119 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 TAF9P2-201ENST00000454958 515 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.67□□□□□ -2.3
HOXC5Q00444 AL162395.1-201ENST00000457882 422 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 AC016632.1-201ENST00000503994 196 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 AK3P2-201ENST00000507976 429 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 RNU6-311P-201ENST00000516224 102 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 AC090572.1-201ENST00000519251 160 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.67□□□□□ -2.3
HOXC5Q00444 TMF1P1-201ENST00000576058 373 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.67□□□□□ -2.3
HOXC5Q00444 AL391646.1-201ENST00000603860 190 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 AC016727.1-205ENST00000605437 569 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 AC008945.2-201ENST00000606056 604 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 TUSC7.1-201ENST00000610969 165 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 MIR338-201ENST00000636369 67 ntBASIC0.67□□□□□ -2.3
HOXC5Q00444 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
HOXC5Q00444 RNA5SP432-201ENST00000362480 116 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 RNU5F-7P-201ENST00000363696 115 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 RNU5E-5P-201ENST00000365379 116 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 AL133396.1-201ENST00000432048 687 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.66□□□□□ -2.3
HOXC5Q00444 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.66□□□□□ -2.3
HOXC5Q00444 AC013470.1-201ENST00000453438 462 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 MTCO2P6-201ENST00000463134 685 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 AC117454.1-201ENST00000491120 168 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 AC104136.1-201ENST00000512969 394 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 SNORA70.22-201ENST00000517160 124 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 DEFB131C-201ENST00000528817 165 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.66□□□□□ -2.3
HOXC5Q00444 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 AC211469.2-201ENST00000605461 205 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 AC008250.2-201ENST00000615261 205 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 MIR7844-201ENST00000616161 122 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.66□□□□□ -2.3
HOXC5Q00444 AC138649.3-201ENST00000622154 254 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 AC011155.2-201ENST00000623202 216 ntBASIC0.66□□□□□ -2.3
HOXC5Q00444 RNU6-827P-201ENST00000365553 106 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 AL117339.3-201ENST00000418733 162 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.65□□□□□ -2.31
HOXC5Q00444 RPL23AP95-201ENST00000426806 265 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 ISCA1P6-201ENST00000427740 390 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.65□□□□□ -2.31
HOXC5Q00444 AC002486.1-201ENST00000435098 391 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 USP9YP12-201ENST00000450481 570 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 ZNF114P1-201ENST00000453500 292 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 SNORD124-201ENST00000459577 104 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 MTND2P14-201ENST00000482139 351 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 HMGN1P12-201ENST00000499125 195 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 RNU2-46P-201ENST00000517038 113 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 AC022878.1-201ENST00000530684 149 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.65□□□□□ -2.31
HOXC5Q00444 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.65□□□□□ -2.31
HOXC5Q00444 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.65□□□□□ -2.31
HOXC5Q00444 MIR4742-201ENST00000581069 85 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 MIR3124-201ENST00000582636 67 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 MIR4653-201ENST00000585107 83 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 AL929325.1-201ENST00000603096 117 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 AL022161.1-201ENST00000604390 213 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 BNIP3P10-201ENST00000605360 577 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms