Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.46□□□□□ -1.85
NKX3-2P78367 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.46□□□□□ -1.85
NKX3-2P78367 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
NKX3-2P78367 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.46□□□□□ -1.86
NKX3-2P78367 AL157777.2-201ENST00000258070 137 ntBASIC3.46□□□□□ -1.86
NKX3-2P78367 Y_RNA.446-201ENST00000384178 104 ntBASIC3.46□□□□□ -1.86
NKX3-2P78367 RNU6-21P-201ENST00000384710 107 ntBASIC3.46□□□□□ -1.86
NKX3-2P78367 Y_RNA.570-201ENST00000384750 101 ntBASIC3.46□□□□□ -1.86
NKX3-2P78367 RNU6-493P-201ENST00000391321 108 ntBASIC3.46□□□□□ -1.86
NKX3-2P78367 SNORA48.8-201ENST00000391324 134 ntBASIC3.46□□□□□ -1.86
NKX3-2P78367 RN7SKP61-201ENST00000410642 295 ntBASIC3.46□□□□□ -1.86
NKX3-2P78367 AC244670.1-201ENST00000436879 112 ntBASIC3.46□□□□□ -1.86
NKX3-2P78367 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.46□□□□□ -1.86
NKX3-2P78367 RPL23AP3-201ENST00000453844 468 ntBASIC3.46□□□□□ -1.86
NKX3-2P78367 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.46□□□□□ -1.86
NKX3-2P78367 RNA5SP310-201ENST00000459084 116 ntBASIC3.46□□□□□ -1.86
NKX3-2P78367 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.46□□□□□ -1.86
NKX3-2P78367 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX3-2P78367 MIR4425-201ENST00000580572 84 ntBASIC3.46□□□□□ -1.86
NKX3-2P78367 ELOCP29-201ENST00000588193 334 ntBASIC3.46□□□□□ -1.86
NKX3-2P78367 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX3-2P78367 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NKX3-2P78367 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX3-2P78367 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX3-2P78367 ADAM3A-203ENST00000461344 2157 ntBASIC3.45□□□□□ -1.86
NKX3-2P78367 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NKX3-2P78367 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.45□□□□□ -1.86
NKX3-2P78367 Y_RNA.626-201ENST00000411288 95 ntBASIC3.45□□□□□ -1.86
NKX3-2P78367 AL358075.3-201ENST00000426289 226 ntBASIC3.45□□□□□ -1.86
NKX3-2P78367 CST9LP2-201ENST00000437612 320 ntBASIC3.45□□□□□ -1.86
NKX3-2P78367 AC010095.1-201ENST00000443543 144 ntBASIC3.45□□□□□ -1.86
NKX3-2P78367 AC117440.1-201ENST00000474107 571 ntBASIC3.45□□□□□ -1.86
NKX3-2P78367 AC006445.2-201ENST00000510061 472 ntBASIC3.45□□□□□ -1.86
NKX3-2P78367 SNORA40.9-201ENST00000515895 93 ntBASIC3.45□□□□□ -1.86
NKX3-2P78367 RNU6-255P-201ENST00000516957 105 ntBASIC3.45□□□□□ -1.86
NKX3-2P78367 CKS1BP7-201ENST00000522230 235 ntBASIC3.45□□□□□ -1.86
NKX3-2P78367 AP002392.1-201ENST00000537692 208 ntBASIC3.45□□□□□ -1.86
NKX3-2P78367 AC011602.1-201ENST00000546484 331 ntBASIC3.45□□□□□ -1.86
NKX3-2P78367 AC006199.1-201ENST00000548728 219 ntBASIC3.45□□□□□ -1.86
NKX3-2P78367 NACAP3-201ENST00000552100 481 ntBASIC3.45□□□□□ -1.86
NKX3-2P78367 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX3-2P78367 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.45□□□□□ -1.86
NKX3-2P78367 AL078605.1-201ENST00000603529 500 ntBASIC3.45□□□□□ -1.86
NKX3-2P78367 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX3-2P78367 AC096644.4-201ENST00000563417 2912 ntBASIC3.45□□□□□ -1.86
NKX3-2P78367 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.45□□□□□ -1.86
NKX3-2P78367 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NKX3-2P78367 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.44□□□□□ -1.86
NKX3-2P78367 AC110491.1-201ENST00000562191 2010 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
NKX3-2P78367 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX3-2P78367 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.44□□□□□ -1.86
NKX3-2P78367 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX3-2P78367 RNU6-545P-201ENST00000362681 104 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 Y_RNA.122-201ENST00000363331 96 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 RNU6-137P-201ENST00000363680 108 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 SNORD115-8-201ENST00000363856 82 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 SNORD115-38-201ENST00000365037 82 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 RNU6-1175P-201ENST00000365200 107 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 RNY4P28-201ENST00000365281 93 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 Y_RNA.418-201ENST00000384029 102 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 MIR549A-201ENST00000385268 96 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 EEF1A1P41-201ENST00000414667 207 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 AC138623.1-201ENST00000418060 216 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.44□□□□□ -1.86
NKX3-2P78367 AL135938.1-201ENST00000443141 297 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 RPL39P29-201ENST00000447779 157 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 RNU7-120P-201ENST00000459334 63 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 AC006483.1-201ENST00000487308 313 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 AC091826.1-201ENST00000514065 313 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 SNORA31.16-201ENST00000516773 139 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 ACA59.2-201ENST00000517061 156 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 AC087441.2-201ENST00000529141 262 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 HMGN2P15-201ENST00000585707 270 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 AC008749.1-201ENST00000597650 306 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 AC010620.2-201ENST00000600135 313 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 AL162424.1-201ENST00000602325 221 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 AL138963.2-201ENST00000605137 226 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
NKX3-2P78367 IGHVIII-44-202ENST00000636235 289 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 MIR3529-201ENST00000637713 78 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.44□□□□□ -1.86
NKX3-2P78367 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.44□□□□□ -1.86
NKX3-2P78367 AC110774.1-201ENST00000623567 2018 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
NKX3-2P78367 RBBP8P1-201ENST00000449447 1844 ntBASIC3.44□□□□□ -1.86
NKX3-2P78367 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX3-2P78367 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.44□□□□□ -1.86
NKX3-2P78367 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
NKX3-2P78367 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX3-2P78367 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NKX3-2P78367 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.43□□□□□ -1.86
NKX3-2P78367 MIR22-201ENST00000362190 85 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 RNU6-1285P-201ENST00000363480 105 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 RNU6-873P-201ENST00000363833 107 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 RNU6-682P-201ENST00000363843 106 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 Y_RNA.292-201ENST00000364904 97 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 RNU6-47P-201ENST00000383866 107 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 RNU6-187P-201ENST00000384139 106 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 RNU6-622P-201ENST00000384272 103 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms