Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RNU6-33P-201ENST00000384793 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU2-3P-201ENST00000410144 191 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST1H3AP68431 MTND3P1-201ENST00000441336 220 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 AC112206.4-201ENST00000515142 405 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 APOOP3-201ENST00000536787 586 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST1H3AP68431 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST1H3AP68431 AC008521.1-201ENST00000587471 187 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 AL592221.1-201ENST00000605266 382 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-6P-201ENST00000606623 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 AP001596.2-201ENST00000608410 312 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 GHRLOS.1-201ENST00000610995 70 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
HIST1H3AP68431 AC009509.4-201ENST00000619202 509 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 AC092268.1-201ENST00000342691 405 ntBASIC0.38□□□□□ -2.35
HIST1H3AP68431 RNU6-552P-201ENST00000362869 119 ntBASIC0.38□□□□□ -2.35
HIST1H3AP68431 U3.4-201ENST00000363352 213 ntBASIC0.38□□□□□ -2.35
HIST1H3AP68431 RNU6-39P-201ENST00000384344 107 ntBASIC0.38□□□□□ -2.35
HIST1H3AP68431 RNU6-607P-201ENST00000411283 108 ntBASIC0.38□□□□□ -2.35
HIST1H3AP68431 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.38□□□□□ -2.35
HIST1H3AP68431 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
HIST1H3AP68431 GAPDHP17-201ENST00000449858 1001 ntBASIC0.38□□□□□ -2.35
HIST1H3AP68431 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.38□□□□□ -2.35
HIST1H3AP68431 AC116347.2-201ENST00000514912 523 ntBASIC0.38□□□□□ -2.35
HIST1H3AP68431 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.38□□□□□ -2.35
HIST1H3AP68431 RNU2-34P-201ENST00000516534 121 ntBASIC0.38□□□□□ -2.35
HIST1H3AP68431 AC010376.1-201ENST00000522101 334 ntBASIC0.38□□□□□ -2.35
HIST1H3AP68431 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.38□□□□□ -2.35
HIST1H3AP68431 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.38□□□□□ -2.35
HIST1H3AP68431 AC112187.2-201ENST00000604345 283 ntBASIC0.38□□□□□ -2.35
HIST1H3AP68431 AL158211.2-201ENST00000607282 395 ntBASIC0.38□□□□□ -2.35
HIST1H3AP68431 AC097478.2-201ENST00000610572 514 ntBASIC0.38□□□□□ -2.35
HIST1H3AP68431 RNU6-336P-201ENST00000364891 107 ntBASIC0.37□□□□□ -2.35
HIST1H3AP68431 RNU6-945P-201ENST00000383947 107 ntBASIC0.37□□□□□ -2.35
HIST1H3AP68431 RNU6-641P-201ENST00000384006 107 ntBASIC0.37□□□□□ -2.35
HIST1H3AP68431 RNA5SP323-201ENST00000391094 133 ntBASIC0.37□□□□□ -2.35
HIST1H3AP68431 MIR208B-201ENST00000401172 77 ntBASIC0.37□□□□□ -2.35
HIST1H3AP68431 RNU2-72P-201ENST00000411175 163 ntBASIC0.37□□□□□ -2.35
HIST1H3AP68431 HMGN2P34-201ENST00000437647 269 ntBASIC0.37□□□□□ -2.35
HIST1H3AP68431 AC117522.1-201ENST00000509821 380 ntBASIC0.37□□□□□ -2.35
HIST1H3AP68431 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.37□□□□□ -2.35
HIST1H3AP68431 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.37□□□□□ -2.35
HIST1H3AP68431 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.37□□□□□ -2.35
HIST1H3AP68431 MIR4753-201ENST00000585119 83 ntBASIC0.37□□□□□ -2.35
HIST1H3AP68431 Z98751.3-201ENST00000604447 521 ntBASIC0.37□□□□□ -2.35
HIST1H3AP68431 AC064872.1-201ENST00000604823 1072 ntBASIC0.37□□□□□ -2.35
HIST1H3AP68431 AC080013.3-201ENST00000606839 578 ntBASIC0.37□□□□□ -2.35
HIST1H3AP68431 AL021368.1-201ENST00000607490 540 ntBASIC0.37□□□□□ -2.35
HIST1H3AP68431 AC116165.2-201ENST00000616705 206 ntBASIC0.37□□□□□ -2.35
HIST1H3AP68431 AL603839.4-201ENST00000624658 1005 ntBASIC0.37□□□□□ -2.35
HIST1H3AP68431 SNORA26.3-201ENST00000391119 136 ntBASIC0.36□□□□□ -2.35
HIST1H3AP68431 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.36□□□□□ -2.35
HIST1H3AP68431 AC098934.3-201ENST00000430450 190 ntBASIC0.36□□□□□ -2.35
HIST1H3AP68431 AL035398.1-201ENST00000430869 322 ntBASIC0.36□□□□□ -2.35
HIST1H3AP68431 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.36□□□□□ -2.35
HIST1H3AP68431 HSFY7P-201ENST00000432672 318 ntBASIC0.36□□□□□ -2.35
HIST1H3AP68431 AC002486.1-201ENST00000435098 391 ntBASIC0.36□□□□□ -2.35
HIST1H3AP68431 HSFY8P-201ENST00000437934 318 ntBASIC0.36□□□□□ -2.35
HIST1H3AP68431 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.36□□□□□ -2.35
HIST1H3AP68431 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.36□□□□□ -2.35
HIST1H3AP68431 AL162395.1-201ENST00000457882 422 ntBASIC0.36□□□□□ -2.35
HIST1H3AP68431 AC098869.1-201ENST00000481627 292 ntBASIC0.36□□□□□ -2.35
HIST1H3AP68431 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.36□□□□□ -2.35
HIST1H3AP68431 AC007834.2-201ENST00000536310 343 ntBASIC0.36□□□□□ -2.35
HIST1H3AP68431 AC080078.2-201ENST00000603766 501 ntBASIC0.36□□□□□ -2.35
HIST1H3AP68431 AL158042.1-201ENST00000605338 460 ntBASIC0.36□□□□□ -2.35
HIST1H3AP68431 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.36□□□□□ -2.35
HIST1H3AP68431 AC019226.2-201ENST00000625973 424 ntBASIC0.36□□□□□ -2.35
HIST1H3AP68431 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.36□□□□□ -2.35
HIST1H3AP68431 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.36□□□□□ -2.35
HIST1H3AP68431 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
HIST1H3AP68431 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.36□□□□□ -2.35
HIST1H3AP68431 RNU6-428P-201ENST00000362942 107 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 SNORD32A-201ENST00000364805 84 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 RNU6-809P-201ENST00000384461 107 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 RNU6-417P-201ENST00000384712 107 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 MIR10B-201ENST00000385011 110 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 MIR300-201ENST00000401138 83 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 MIR1283-1-201ENST00000408494 87 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 RNU2-39P-201ENST00000410604 198 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.35□□□□□ -2.35
HIST1H3AP68431 MTATP6P20-201ENST00000414147 562 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 AC137499.1-201ENST00000427602 88 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 TIMM9P3-201ENST00000428659 274 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.35□□□□□ -2.35
HIST1H3AP68431 AC119618.1-201ENST00000434191 222 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 RPEP5-201ENST00000441137 268 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.35□□□□□ -2.35
HIST1H3AP68431 AC016717.1-201ENST00000448918 286 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 AL133217.1-201ENST00000450980 425 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.35□□□□□ -2.35
HIST1H3AP68431 RPS26P48-201ENST00000491713 339 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 AC016632.1-201ENST00000503994 196 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.35□□□□□ -2.35
HIST1H3AP68431 RNU4-57P-201ENST00000515980 135 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 RNU6-1146P-201ENST00000516282 102 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 SNORA31.10-201ENST00000516482 106 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 RNU6-567P-201ENST00000516746 107 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms