Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RNU6-1168P-201ENST00000390831 104 ntBASIC3.46□□□□□ -1.86
YBX1P67809 Y_RNA.586-201ENST00000391146 98 ntBASIC3.46□□□□□ -1.86
YBX1P67809 RNU2-54P-201ENST00000410299 190 ntBASIC3.46□□□□□ -1.86
YBX1P67809 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.46□□□□□ -1.86
YBX1P67809 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.46□□□□□ -1.86
YBX1P67809 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.46□□□□□ -1.86
YBX1P67809 RNA5SP272-201ENST00000516095 111 ntBASIC3.46□□□□□ -1.86
YBX1P67809 RNU6-426P-201ENST00000516464 97 ntBASIC3.46□□□□□ -1.86
YBX1P67809 SNORA31.16-201ENST00000516773 139 ntBASIC3.46□□□□□ -1.86
YBX1P67809 NACAP3-201ENST00000552100 481 ntBASIC3.46□□□□□ -1.86
YBX1P67809 MIR3674-201ENST00000636576 68 ntBASIC3.46□□□□□ -1.86
YBX1P67809 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.46□□□□□ -1.86
YBX1P67809 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.46□□□□□ -1.86
YBX1P67809 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
YBX1P67809 ADAM3A-203ENST00000461344 2157 ntBASIC3.46□□□□□ -1.86
YBX1P67809 AC100821.1-201ENST00000523153 2479 ntBASIC3.46□□□□□ -1.86
YBX1P67809 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
YBX1P67809 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.45□□□□□ -1.86
YBX1P67809 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
YBX1P67809 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
YBX1P67809 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
YBX1P67809 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
YBX1P67809 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
YBX1P67809 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
YBX1P67809 Y_RNA.75-201ENST00000362927 97 ntBASIC3.45□□□□□ -1.86
YBX1P67809 Y_RNA.121-201ENST00000363309 113 ntBASIC3.45□□□□□ -1.86
YBX1P67809 RNU6-818P-201ENST00000364837 108 ntBASIC3.45□□□□□ -1.86
YBX1P67809 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.45□□□□□ -1.86
YBX1P67809 RNA5SP390-201ENST00000410191 113 ntBASIC3.45□□□□□ -1.86
YBX1P67809 AC009963.1-201ENST00000417265 157 ntBASIC3.45□□□□□ -1.86
YBX1P67809 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.45□□□□□ -1.86
YBX1P67809 RPS20P10-201ENST00000451209 253 ntBASIC3.45□□□□□ -1.86
YBX1P67809 RPL26P9-201ENST00000457466 433 ntBASIC3.45□□□□□ -1.86
YBX1P67809 AC090525.1-201ENST00000479116 478 ntBASIC3.45□□□□□ -1.86
YBX1P67809 AC106707.2-201ENST00000484182 374 ntBASIC3.45□□□□□ -1.86
YBX1P67809 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.45□□□□□ -1.86
YBX1P67809 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.45□□□□□ -1.86
YBX1P67809 AC005840.1-201ENST00000498412 377 ntBASIC3.45□□□□□ -1.86
YBX1P67809 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.45□□□□□ -1.86
YBX1P67809 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.45□□□□□ -1.86
YBX1P67809 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.45□□□□□ -1.86
YBX1P67809 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.45□□□□□ -1.86
YBX1P67809 TGIF1P1-201ENST00000558095 802 ntBASIC3.45□□□□□ -1.86
YBX1P67809 MIR3684-201ENST00000579779 74 ntBASIC3.45□□□□□ -1.86
YBX1P67809 AC006380.1-201ENST00000603598 186 ntBASIC3.45□□□□□ -1.86
YBX1P67809 AC005000.2-201ENST00000605468 310 ntBASIC3.45□□□□□ -1.86
YBX1P67809 RNVU1-4-201ENST00000612985 164 ntBASIC3.45□□□□□ -1.86
YBX1P67809 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
YBX1P67809 AC002076.2-201ENST00000617362 122 ntBASIC3.45□□□□□ -1.86
YBX1P67809 MIR6076-201ENST00000617521 113 ntBASIC3.45□□□□□ -1.86
YBX1P67809 Y_RNA.778-201ENST00000620203 90 ntBASIC3.45□□□□□ -1.86
YBX1P67809 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
YBX1P67809 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
YBX1P67809 MAPK10-373ENST00000641983 6772 ntBASIC3.45□□□□□ -1.86
YBX1P67809 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
YBX1P67809 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.45□□□□□ -1.86
YBX1P67809 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
YBX1P67809 AP001486.2-201ENST00000561652 5113 ntBASIC3.44□□□□□ -1.86
YBX1P67809 Y_RNA.329-201ENST00000365209 107 ntBASIC3.44□□□□□ -1.86
YBX1P67809 RNU6-245P-201ENST00000384020 107 ntBASIC3.44□□□□□ -1.86
YBX1P67809 SNORA26.3-201ENST00000391119 136 ntBASIC3.44□□□□□ -1.86
YBX1P67809 HMGN2P10-201ENST00000448085 265 ntBASIC3.44□□□□□ -1.86
YBX1P67809 Y_RNA.637-201ENST00000459424 114 ntBASIC3.44□□□□□ -1.86
YBX1P67809 AC007215.1-201ENST00000464893 276 ntBASIC3.44□□□□□ -1.86
YBX1P67809 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
YBX1P67809 Y_RNA.797-201ENST00000515977 94 ntBASIC3.44□□□□□ -1.86
YBX1P67809 RNU6-928P-201ENST00000516876 104 ntBASIC3.44□□□□□ -1.86
YBX1P67809 MIR2276-201ENST00000516886 89 ntBASIC3.44□□□□□ -1.86
YBX1P67809 RNU6-1231P-201ENST00000517185 103 ntBASIC3.44□□□□□ -1.86
YBX1P67809 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.44□□□□□ -1.86
YBX1P67809 AC021739.1-201ENST00000559631 174 ntBASIC3.44□□□□□ -1.86
YBX1P67809 AC009127.3-201ENST00000570531 403 ntBASIC3.44□□□□□ -1.86
YBX1P67809 MIR4425-201ENST00000580572 84 ntBASIC3.44□□□□□ -1.86
YBX1P67809 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.44□□□□□ -1.86
YBX1P67809 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.44□□□□□ -1.86
YBX1P67809 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.44□□□□□ -1.86
YBX1P67809 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
YBX1P67809 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
YBX1P67809 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
YBX1P67809 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
YBX1P67809 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.44□□□□□ -1.86
YBX1P67809 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
YBX1P67809 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
YBX1P67809 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
YBX1P67809 AC068647.1-201ENST00000489539 2265 ntBASIC3.44□□□□□ -1.86
YBX1P67809 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.44□□□□□ -1.86
YBX1P67809 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
YBX1P67809 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
YBX1P67809 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.43□□□□□ -1.86
YBX1P67809 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
YBX1P67809 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.43□□□□□ -1.86
YBX1P67809 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
YBX1P67809 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
YBX1P67809 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
YBX1P67809 RNU6-799P-201ENST00000363567 107 ntBASIC3.43□□□□□ -1.86
YBX1P67809 RNU6-324P-201ENST00000363957 106 ntBASIC3.43□□□□□ -1.86
YBX1P67809 EI24P2-201ENST00000397776 1076 ntBASIC3.43□□□□□ -1.86
YBX1P67809 MIR208B-201ENST00000401172 77 ntBASIC3.43□□□□□ -1.86
YBX1P67809 MIR320B2-201ENST00000408479 138 ntBASIC3.43□□□□□ -1.86
YBX1P67809 MIR1183-201ENST00000408856 89 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms