Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNU6-441P-201ENST00000384545 106 ntBASIC-1.56□□□□□ -2.66
RPL39P62891 AL603865.2-201ENST00000401679 213 ntBASIC-1.56□□□□□ -2.66
RPL39P62891 AL357139.1-201ENST00000407792 426 ntBASIC-1.56□□□□□ -2.66
RPL39P62891 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-1.56□□□□□ -2.66
RPL39P62891 AC023442.1-201ENST00000531247 422 ntBASIC-1.56□□□□□ -2.66
RPL39P62891 AP002001.1-203ENST00000534002 267 ntBASIC-1.56□□□□□ -2.66
RPL39P62891 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-1.56□□□□□ -2.66
RPL39P62891 AL355297.3-201ENST00000604082 446 ntBASIC-1.56□□□□□ -2.66
RPL39P62891 AC107952.2-201ENST00000606048 486 ntBASIC-1.56□□□□□ -2.66
RPL39P62891 MIR338-201ENST00000636369 67 ntBASIC-1.56□□□□□ -2.66
RPL39P62891 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-1.56□□□□□ -2.66
RPL39P62891 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-1.56□□□□□ -2.66
RPL39P62891 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.57□□□□□ -2.66
RPL39P62891 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.57□□□□□ -2.66
RPL39P62891 MIR153-2-201ENST00000385225 87 ntBASIC-1.57□□□□□ -2.66
RPL39P62891 AL451046.2-201ENST00000403074 277 ntBASIC-1.57□□□□□ -2.66
RPL39P62891 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-1.57□□□□□ -2.66
RPL39P62891 AC069271.1-201ENST00000445577 156 ntBASIC-1.57□□□□□ -2.66
RPL39P62891 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.57□□□□□ -2.66
RPL39P62891 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-1.57□□□□□ -2.66
RPL39P62891 AC004987.4-201ENST00000603383 338 ntBASIC-1.57□□□□□ -2.66
RPL39P62891 AC007014.2-201ENST00000615581 479 ntBASIC-1.57□□□□□ -2.66
RPL39P62891 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.58□□□□□ -2.66
RPL39P62891 RNU6-39P-201ENST00000384344 107 ntBASIC-1.58□□□□□ -2.66
RPL39P62891 MIR186-201ENST00000384988 86 ntBASIC-1.58□□□□□ -2.66
RPL39P62891 MIR563-201ENST00000385080 79 ntBASIC-1.58□□□□□ -2.66
RPL39P62891 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-1.58□□□□□ -2.66
RPL39P62891 STAG3L5P-204ENST00000443759 179 ntBASIC-1.58□□□□□ -2.66
RPL39P62891 AC007215.1-201ENST00000464893 276 ntBASIC-1.58□□□□□ -2.66
RPL39P62891 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-1.58□□□□□ -2.66
RPL39P62891 AC107401.1-201ENST00000503426 685 ntBASIC-1.58□□□□□ -2.66
RPL39P62891 AC090572.1-201ENST00000519251 160 ntBASIC-1.58□□□□□ -2.66
RPL39P62891 AC138869.1-201ENST00000568623 124 ntBASIC-1.58□□□□□ -2.66
RPL39P62891 AL355598.1-201ENST00000604169 202 ntBASIC-1.58□□□□□ -2.66
RPL39P62891 AC034229.4-201ENST00000607861 441 ntBASIC-1.58□□□□□ -2.66
RPL39P62891 RNY4P3-201ENST00000365254 95 ntBASIC-1.59□□□□□ -2.66
RPL39P62891 RNU6-811P-201ENST00000384069 107 ntBASIC-1.59□□□□□ -2.66
RPL39P62891 MIR29B2-201ENST00000385055 81 ntBASIC-1.59□□□□□ -2.66
RPL39P62891 RNU2-3P-201ENST00000410144 191 ntBASIC-1.59□□□□□ -2.66
RPL39P62891 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.59□□□□□ -2.66
RPL39P62891 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-1.59□□□□□ -2.66
RPL39P62891 TPT1P7-201ENST00000458300 517 ntBASIC-1.59□□□□□ -2.66
RPL39P62891 RPL32P14-201ENST00000463196 378 ntBASIC-1.59□□□□□ -2.66
RPL39P62891 RPL17P19-201ENST00000489069 552 ntBASIC-1.59□□□□□ -2.66
RPL39P62891 AC111193.1-201ENST00000504097 155 ntBASIC-1.59□□□□□ -2.66
RPL39P62891 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-1.59□□□□□ -2.66
RPL39P62891 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.59□□□□□ -2.66
RPL39P62891 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-1.59□□□□□ -2.66
RPL39P62891 CR383656.7-201ENST00000548164 174 ntBASIC-1.59□□□□□ -2.66
RPL39P62891 AC023824.3-201ENST00000569003 562 ntBASIC-1.59□□□□□ -2.66
RPL39P62891 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-1.6□□□□□ -2.67
RPL39P62891 RNU6-858P-201ENST00000362436 107 ntBASIC-1.6□□□□□ -2.67
RPL39P62891 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.6□□□□□ -2.67
RPL39P62891 RNU4-76P-201ENST00000364509 141 ntBASIC-1.6□□□□□ -2.67
RPL39P62891 AC092427.1-201ENST00000439177 601 ntBASIC-1.6□□□□□ -2.67
RPL39P62891 AC093019.1-201ENST00000443135 252 ntBASIC-1.6□□□□□ -2.67
RPL39P62891 AC079354.2-201ENST00000453523 154 ntBASIC-1.6□□□□□ -2.67
RPL39P62891 U8.21-201ENST00000459536 136 ntBASIC-1.6□□□□□ -2.67
RPL39P62891 RNU6-488P-201ENST00000515918 99 ntBASIC-1.6□□□□□ -2.67
RPL39P62891 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC-1.6□□□□□ -2.67
RPL39P62891 AC004832.4-201ENST00000608952 331 ntBASIC-1.6□□□□□ -2.67
RPL39P62891 AL357080.1-201ENST00000617394 239 ntBASIC-1.6□□□□□ -2.67
RPL39P62891 MIR6738-201ENST00000619620 64 ntBASIC-1.6□□□□□ -2.67
RPL39P62891 MIR340-201ENST00000362125 95 ntBASIC-1.61□□□□□ -2.67
RPL39P62891 RNY3P5-201ENST00000384127 102 ntBASIC-1.61□□□□□ -2.67
RPL39P62891 FCF1P10-201ENST00000407590 479 ntBASIC-1.61□□□□□ -2.67
RPL39P62891 ZNF885P-201ENST00000420174 1098 ntBASIC-1.61□□□□□ -2.67
RPL39P62891 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-1.61□□□□□ -2.67
RPL39P62891 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-1.61□□□□□ -2.67
RPL39P62891 AC093303.1-201ENST00000514549 295 ntBASIC-1.61□□□□□ -2.67
RPL39P62891 MIR449C-201ENST00000516047 92 ntBASIC-1.61□□□□□ -2.67
RPL39P62891 MRPS36P4-201ENST00000534436 298 ntBASIC-1.61□□□□□ -2.67
RPL39P62891 CR383656.4-201ENST00000546909 122 ntBASIC-1.61□□□□□ -2.67
RPL39P62891 AC004584.2-201ENST00000570407 410 ntBASIC-1.61□□□□□ -2.67
RPL39P62891 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.61□□□□□ -2.67
RPL39P62891 AL671309.1-201ENST00000603750 544 ntBASIC-1.61□□□□□ -2.67
RPL39P62891 AC104820.1-201ENST00000624183 307 ntBASIC-1.61□□□□□ -2.67
RPL39P62891 FER-210ENST00000628534 558 ntTSL 5 BASIC-1.61□□□□□ -2.67
RPL39P62891 AC106754.1-201ENST00000562632 1513 ntBASIC-1.61□□□□□ -2.67
RPL39P62891 MIR148A-201ENST00000362215 68 ntBASIC-1.62□□□□□ -2.67
RPL39P62891 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.62□□□□□ -2.67
RPL39P62891 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-1.62□□□□□ -2.67
RPL39P62891 RPL39P34-201ENST00000477141 156 ntBASIC-1.62□□□□□ -2.67
RPL39P62891 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-1.62□□□□□ -2.67
RPL39P62891 AC022022.2-201ENST00000602989 360 ntBASIC-1.62□□□□□ -2.67
RPL39P62891 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-1.62□□□□□ -2.67
RPL39P62891 U6.99-201ENST00000637524 83 ntBASIC-1.62□□□□□ -2.67
RPL39P62891 RNU6-1010P-201ENST00000362757 107 ntBASIC-1.63□□□□□ -2.67
RPL39P62891 Y_RNA.567-201ENST00000384736 106 ntBASIC-1.63□□□□□ -2.67
RPL39P62891 MTCO1P21-201ENST00000416634 589 ntBASIC-1.63□□□□□ -2.67
RPL39P62891 AC060773.1-201ENST00000421698 310 ntBASIC-1.63□□□□□ -2.67
RPL39P62891 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.63□□□□□ -2.67
RPL39P62891 AC004854.1-201ENST00000440356 349 ntBASIC-1.63□□□□□ -2.67
RPL39P62891 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-1.63□□□□□ -2.67
RPL39P62891 TPRKBP2-201ENST00000565969 475 ntBASIC-1.63□□□□□ -2.67
RPL39P62891 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-1.63□□□□□ -2.67
RPL39P62891 AC125232.2-201ENST00000592457 143 ntBASIC-1.63□□□□□ -2.67
RPL39P62891 AC234772.3-201ENST00000602277 528 ntBASIC-1.63□□□□□ -2.67
RPL39P62891 RNU6-24P-201ENST00000384440 107 ntBASIC-1.64□□□□□ -2.67
RPL39P62891 MIR587-201ENST00000384845 96 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms