Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RNU6-1023P-201ENST00000516137 106 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HERVK_113P62684 UBL5P4-201ENST00000562584 236 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 MIR5571-201ENST00000577998 113 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.43□□□□□ -1.86
HERVK_113P62684 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.43□□□□□ -1.86
HERVK_113P62684 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.43□□□□□ -1.86
HERVK_113P62684 LINC02555-201ENST00000563933 1951 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HERVK_113P62684 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HERVK_113P62684 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HERVK_113P62684 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HERVK_113P62684 AC092268.1-201ENST00000342691 405 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 RNA5SP361-201ENST00000362686 118 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 snoU2_19.2-201ENST00000363024 80 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 Y_RNA.237-201ENST00000364439 102 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 U8.10-201ENST00000384260 133 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 RNU6-318P-201ENST00000384283 103 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 RNU6-937P-201ENST00000384325 106 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 RNU1-139P-201ENST00000391307 165 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 EI24P2-201ENST00000397776 1076 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.42□□□□□ -1.86
HERVK_113P62684 AL590135.1-201ENST00000422215 156 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 AC019205.3-201ENST00000424573 156 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 UQCRHP3-201ENST00000451503 251 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 AC093331.1-201ENST00000521474 169 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 DEFB108E-201ENST00000524692 240 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 AC027288.2-201ENST00000553028 243 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 AC021231.3-201ENST00000558497 370 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 AL138963.2-201ENST00000605137 226 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.42□□□□□ -1.86
HERVK_113P62684 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.42□□□□□ -1.86
HERVK_113P62684 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HERVK_113P62684 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.42□□□□□ -1.86
HERVK_113P62684 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HERVK_113P62684 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.41□□□□□ -1.86
HERVK_113P62684 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HERVK_113P62684 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.41□□□□□ -1.86
HERVK_113P62684 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.41□□□□□ -1.86
HERVK_113P62684 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HERVK_113P62684 RNU6-622P-201ENST00000384272 103 ntBASIC3.41□□□□□ -1.86
HERVK_113P62684 Y_RNA.562-201ENST00000384695 113 ntBASIC3.41□□□□□ -1.86
HERVK_113P62684 RNA5SP252-201ENST00000391131 119 ntBASIC3.41□□□□□ -1.86
HERVK_113P62684 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HERVK_113P62684 SNORD12B-201ENST00000410433 91 ntBASIC3.41□□□□□ -1.86
HERVK_113P62684 AC138623.1-201ENST00000418060 216 ntBASIC3.41□□□□□ -1.86
HERVK_113P62684 AC009969.1-201ENST00000438726 172 ntBASIC3.41□□□□□ -1.86
HERVK_113P62684 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.41□□□□□ -1.86
HERVK_113P62684 AL109933.2-201ENST00000452651 260 ntBASIC3.41□□□□□ -1.86
HERVK_113P62684 AP002884.2-201ENST00000471647 395 ntBASIC3.41□□□□□ -1.86
HERVK_113P62684 HMGB3P17-201ENST00000504195 649 ntBASIC3.41□□□□□ -1.86
HERVK_113P62684 SNORD59.2-201ENST00000516873 68 ntBASIC3.41□□□□□ -1.86
HERVK_113P62684 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.41□□□□□ -1.86
HERVK_113P62684 AC011373.1-201ENST00000607270 237 ntBASIC3.41□□□□□ -1.86
HERVK_113P62684 AC107294.3-201ENST00000609211 526 ntBASIC3.41□□□□□ -1.86
HERVK_113P62684 AP001282.2-201ENST00000616149 309 ntBASIC3.41□□□□□ -1.86
HERVK_113P62684 AL138880.2-201ENST00000616214 239 ntBASIC3.41□□□□□ -1.86
HERVK_113P62684 AC007318.2-201ENST00000620999 243 ntBASIC3.41□□□□□ -1.86
HERVK_113P62684 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.41□□□□□ -1.86
HERVK_113P62684 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
HERVK_113P62684 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.41□□□□□ -1.86
HERVK_113P62684 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
HERVK_113P62684 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
HERVK_113P62684 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HERVK_113P62684 AL391987.6-201ENST00000305671 199 ntBASIC3.4□□□□□ -1.87
HERVK_113P62684 SNORD27-201ENST00000363981 72 ntBASIC3.4□□□□□ -1.87
HERVK_113P62684 RNU6-487P-201ENST00000365430 104 ntBASIC3.4□□□□□ -1.87
HERVK_113P62684 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
HERVK_113P62684 MIR10B-201ENST00000385011 110 ntBASIC3.4□□□□□ -1.87
HERVK_113P62684 RNU1-101P-201ENST00000391171 127 ntBASIC3.4□□□□□ -1.87
HERVK_113P62684 RN7SKP284-201ENST00000411002 343 ntBASIC3.4□□□□□ -1.87
HERVK_113P62684 AC096638.1-201ENST00000444678 216 ntBASIC3.4□□□□□ -1.87
HERVK_113P62684 RNU7-23P-201ENST00000459465 62 ntBASIC3.4□□□□□ -1.87
HERVK_113P62684 RN7SL20P-201ENST00000488827 297 ntBASIC3.4□□□□□ -1.87
HERVK_113P62684 SNORA31.16-201ENST00000516773 139 ntBASIC3.4□□□□□ -1.87
HERVK_113P62684 RNU6-58P-201ENST00000517143 103 ntBASIC3.4□□□□□ -1.87
HERVK_113P62684 AC107016.2-201ENST00000547968 190 ntBASIC3.4□□□□□ -1.87
HERVK_113P62684 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.4□□□□□ -1.87
HERVK_113P62684 AC096644.4-201ENST00000563417 2912 ntBASIC3.4□□□□□ -1.87
HERVK_113P62684 AC105137.2-201ENST00000569073 466 ntBASIC3.4□□□□□ -1.87
HERVK_113P62684 AC091152.3-201ENST00000604227 325 ntBASIC3.4□□□□□ -1.87
HERVK_113P62684 AL450472.1-202ENST00000637286 180 ntBASIC3.4□□□□□ -1.87
HERVK_113P62684 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HERVK_113P62684 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HERVK_113P62684 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HERVK_113P62684 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.39□□□□□ -1.87
HERVK_113P62684 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HERVK_113P62684 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.39□□□□□ -1.87
HERVK_113P62684 Y_RNA.54-201ENST00000362766 105 ntBASIC3.39□□□□□ -1.87
HERVK_113P62684 RNU6-1285P-201ENST00000363480 105 ntBASIC3.39□□□□□ -1.87
HERVK_113P62684 SNORD113-8-201ENST00000363497 74 ntBASIC3.39□□□□□ -1.87
HERVK_113P62684 Y_RNA.515-201ENST00000384535 112 ntBASIC3.39□□□□□ -1.87
HERVK_113P62684 MIR147B-201ENST00000390185 80 ntBASIC3.39□□□□□ -1.87
HERVK_113P62684 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.39□□□□□ -1.87
HERVK_113P62684 AC012306.1-201ENST00000423267 114 ntBASIC3.39□□□□□ -1.87
HERVK_113P62684 AL441985.1-201ENST00000457727 251 ntBASIC3.39□□□□□ -1.87
HERVK_113P62684 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.39□□□□□ -1.87
HERVK_113P62684 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.39□□□□□ -1.87
HERVK_113P62684 AC090525.1-201ENST00000479116 478 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms