Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC068587.4-201ENST00000533893 186 ntBASIC0.23□□□□□ -2.37
VBP1P61758 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.23□□□□□ -2.37
VBP1P61758 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.23□□□□□ -2.37
VBP1P61758 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.23□□□□□ -2.37
VBP1P61758 MIR4714-201ENST00000580728 77 ntBASIC0.23□□□□□ -2.37
VBP1P61758 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.23□□□□□ -2.37
VBP1P61758 AL359740.1-201ENST00000624340 592 ntBASIC0.23□□□□□ -2.37
VBP1P61758 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.22□□□□□ -2.37
VBP1P61758 RNU4-56P-201ENST00000364700 142 ntBASIC0.22□□□□□ -2.37
VBP1P61758 RNU6-336P-201ENST00000364891 107 ntBASIC0.22□□□□□ -2.37
VBP1P61758 RNU6-607P-201ENST00000411283 108 ntBASIC0.22□□□□□ -2.37
VBP1P61758 AC078809.1-201ENST00000427601 140 ntBASIC0.22□□□□□ -2.37
VBP1P61758 Z73417.1-201ENST00000447373 778 ntBASIC0.22□□□□□ -2.37
VBP1P61758 AC025465.4-201ENST00000513422 638 ntBASIC0.22□□□□□ -2.37
VBP1P61758 SNORA68.3-201ENST00000515906 83 ntBASIC0.22□□□□□ -2.37
VBP1P61758 RNA5SP458-201ENST00000516188 119 ntBASIC0.22□□□□□ -2.37
VBP1P61758 RNA5SP337-201ENST00000517007 109 ntBASIC0.22□□□□□ -2.37
VBP1P61758 RNU6-1003P-201ENST00000517099 105 ntBASIC0.22□□□□□ -2.37
VBP1P61758 RNU6-201P-201ENST00000517100 61 ntBASIC0.22□□□□□ -2.37
VBP1P61758 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.22□□□□□ -2.37
VBP1P61758 TMF1P1-201ENST00000576058 373 ntBASIC0.22□□□□□ -2.37
VBP1P61758 MIR4778-201ENST00000577635 80 ntBASIC0.22□□□□□ -2.37
VBP1P61758 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.22□□□□□ -2.37
VBP1P61758 AC022217.4-201ENST00000604389 163 ntBASIC0.22□□□□□ -2.37
VBP1P61758 AC104458.1-201ENST00000608243 463 ntBASIC0.22□□□□□ -2.37
VBP1P61758 AL360219.1-201ENST00000610230 366 ntBASIC0.22□□□□□ -2.37
VBP1P61758 AP000484.1-201ENST00000620067 1252 ntBASIC0.22□□□□□ -2.37
VBP1P61758 AC091948.2-201ENST00000636510 279 ntBASIC0.22□□□□□ -2.37
VBP1P61758 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.22□□□□□ -2.37
VBP1P61758 CASC19-280ENST00000642102 1351 ntBASIC0.21□□□□□ -2.38
VBP1P61758 MIR96-201ENST00000362288 78 ntBASIC0.21□□□□□ -2.38
VBP1P61758 RNU6-552P-201ENST00000362869 119 ntBASIC0.21□□□□□ -2.38
VBP1P61758 SNORA26.3-201ENST00000391119 136 ntBASIC0.21□□□□□ -2.38
VBP1P61758 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.21□□□□□ -2.38
VBP1P61758 DAP3P1-201ENST00000441522 278 ntBASIC0.21□□□□□ -2.38
VBP1P61758 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.21□□□□□ -2.38
VBP1P61758 AL049830.1-201ENST00000468034 425 ntBASIC0.21□□□□□ -2.38
VBP1P61758 AC022493.2-201ENST00000506122 481 ntBASIC0.21□□□□□ -2.38
VBP1P61758 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.21□□□□□ -2.38
VBP1P61758 AC022616.6-201ENST00000520479 119 ntBASIC0.21□□□□□ -2.38
VBP1P61758 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.21□□□□□ -2.38
VBP1P61758 AC008015.1-201ENST00000555505 465 ntBASIC0.21□□□□□ -2.38
VBP1P61758 MIR5692A1-201ENST00000580523 69 ntBASIC0.21□□□□□ -2.38
VBP1P61758 PRELID3BP2-201ENST00000605362 201 ntBASIC0.21□□□□□ -2.38
VBP1P61758 AC121334.2-201ENST00000605387 271 ntBASIC0.21□□□□□ -2.38
VBP1P61758 AC013244.3-201ENST00000605614 388 ntBASIC0.21□□□□□ -2.38
VBP1P61758 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.21□□□□□ -2.38
VBP1P61758 U6.108-201ENST00000637764 58 ntBASIC0.21□□□□□ -2.38
VBP1P61758 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.21□□□□□ -2.38
VBP1P61758 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.2□□□□□ -2.38
VBP1P61758 U3.4-201ENST00000363352 213 ntBASIC0.2□□□□□ -2.38
VBP1P61758 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
VBP1P61758 RNU6-1235P-201ENST00000384559 107 ntBASIC0.2□□□□□ -2.38
VBP1P61758 MIR653-201ENST00000385279 96 ntBASIC0.2□□□□□ -2.38
VBP1P61758 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
VBP1P61758 AC007283.2-201ENST00000424739 197 ntBASIC0.2□□□□□ -2.38
VBP1P61758 AC002486.1-201ENST00000435098 391 ntBASIC0.2□□□□□ -2.38
VBP1P61758 snoU13.25-201ENST00000458945 104 ntBASIC0.2□□□□□ -2.38
VBP1P61758 RNU7-90P-201ENST00000459216 62 ntBASIC0.2□□□□□ -2.38
VBP1P61758 RNU6-498P-201ENST00000459468 107 ntBASIC0.2□□□□□ -2.38
VBP1P61758 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.2□□□□□ -2.38
VBP1P61758 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.2□□□□□ -2.38
VBP1P61758 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.2□□□□□ -2.38
VBP1P61758 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.2□□□□□ -2.38
VBP1P61758 MIR4524B-201ENST00000581569 115 ntBASIC0.2□□□□□ -2.38
VBP1P61758 Z99289.3-201ENST00000605586 594 ntBASIC0.2□□□□□ -2.38
VBP1P61758 AC009994.1-201ENST00000606889 253 ntBASIC0.2□□□□□ -2.38
VBP1P61758 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.2□□□□□ -2.38
VBP1P61758 MIR8054-201ENST00000620877 86 ntBASIC0.2□□□□□ -2.38
VBP1P61758 AC006001.4-201ENST00000622243 395 ntBASIC0.2□□□□□ -2.38
VBP1P61758 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
VBP1P61758 MTND5P16-201ENST00000460269 1703 ntBASIC0.19□□□□□ -2.38
VBP1P61758 AC090625.1-201ENST00000357130 210 ntBASIC0.19□□□□□ -2.38
VBP1P61758 MIR337-201ENST00000362281 93 ntBASIC0.19□□□□□ -2.38
VBP1P61758 RNA5SP99-201ENST00000364020 114 ntBASIC0.19□□□□□ -2.38
VBP1P61758 RNU4-76P-201ENST00000364509 141 ntBASIC0.19□□□□□ -2.38
VBP1P61758 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.19□□□□□ -2.38
VBP1P61758 RNY1P8-201ENST00000383970 114 ntBASIC0.19□□□□□ -2.38
VBP1P61758 SNORD116-13-201ENST00000384408 92 ntBASIC0.19□□□□□ -2.38
VBP1P61758 Y_RNA.504-201ENST00000384481 104 ntBASIC0.19□□□□□ -2.38
VBP1P61758 SNORA16.2-201ENST00000390991 127 ntBASIC0.19□□□□□ -2.38
VBP1P61758 MIR208B-201ENST00000401172 77 ntBASIC0.19□□□□□ -2.38
VBP1P61758 MIR1283-1-201ENST00000408494 87 ntBASIC0.19□□□□□ -2.38
VBP1P61758 AL133396.1-201ENST00000432048 687 ntBASIC0.19□□□□□ -2.38
VBP1P61758 AC005002.2-201ENST00000438228 269 ntBASIC0.19□□□□□ -2.38
VBP1P61758 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.19□□□□□ -2.38
VBP1P61758 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.19□□□□□ -2.38
VBP1P61758 SRRM1P2-201ENST00000464531 1192 ntBASIC0.19□□□□□ -2.38
VBP1P61758 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.19□□□□□ -2.38
VBP1P61758 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.19□□□□□ -2.38
VBP1P61758 AL512605.2-201ENST00000592972 256 ntBASIC0.19□□□□□ -2.38
VBP1P61758 AC080013.3-201ENST00000606839 578 ntBASIC0.19□□□□□ -2.38
VBP1P61758 PART1_2.1-201ENST00000612397 250 ntBASIC0.19□□□□□ -2.38
VBP1P61758 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.19□□□□□ -2.38
VBP1P61758 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.19□□□□□ -2.38
VBP1P61758 MTND4P5-201ENST00000435821 1374 ntBASIC0.19□□□□□ -2.38
VBP1P61758 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.18□□□□□ -2.38
VBP1P61758 AC092268.1-201ENST00000342691 405 ntBASIC0.18□□□□□ -2.38
VBP1P61758 Y_RNA.324-201ENST00000365165 102 ntBASIC0.18□□□□□ -2.38
VBP1P61758 RNU6-61P-201ENST00000365528 109 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms