Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SNORD115-3-201ENST00000363100 82 ntBASIC2.72□□□□□ -1.97
RHBDL3P58872 RNU6-1026P-201ENST00000384465 108 ntBASIC2.72□□□□□ -1.97
RHBDL3P58872 MIR144-201ENST00000384886 86 ntBASIC2.72□□□□□ -1.97
RHBDL3P58872 RNU6-1148P-201ENST00000410992 104 ntBASIC2.72□□□□□ -1.97
RHBDL3P58872 Z82205.1-201ENST00000428456 297 ntBASIC2.72□□□□□ -1.97
RHBDL3P58872 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.72□□□□□ -1.97
RHBDL3P58872 MTND1P17-201ENST00000448961 204 ntBASIC2.72□□□□□ -1.97
RHBDL3P58872 snoU13.6-201ENST00000458785 104 ntBASIC2.72□□□□□ -1.97
RHBDL3P58872 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.72□□□□□ -1.97
RHBDL3P58872 MIR449C-201ENST00000516047 92 ntBASIC2.72□□□□□ -1.97
RHBDL3P58872 AP003033.1-201ENST00000527244 415 ntBASIC2.72□□□□□ -1.97
RHBDL3P58872 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.72□□□□□ -1.97
RHBDL3P58872 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.72□□□□□ -1.97
RHBDL3P58872 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.72□□□□□ -1.97
RHBDL3P58872 MIR7843-201ENST00000622274 79 ntBASIC2.72□□□□□ -1.97
RHBDL3P58872 SCARNA4-201ENST00000629045 128 ntBASIC2.72□□□□□ -1.97
RHBDL3P58872 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.72□□□□□ -1.97
RHBDL3P58872 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RHBDL3P58872 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.71□□□□□ -1.98
RHBDL3P58872 RNU1-76P-201ENST00000362903 159 ntBASIC2.71□□□□□ -1.98
RHBDL3P58872 SNORA25.6-201ENST00000364121 118 ntBASIC2.71□□□□□ -1.98
RHBDL3P58872 RNU4-9P-201ENST00000364951 139 ntBASIC2.71□□□□□ -1.98
RHBDL3P58872 RNU6-596P-201ENST00000365395 98 ntBASIC2.71□□□□□ -1.98
RHBDL3P58872 AL356776.1-201ENST00000406574 447 ntBASIC2.71□□□□□ -1.98
RHBDL3P58872 RNU2-41P-201ENST00000410991 178 ntBASIC2.71□□□□□ -1.98
RHBDL3P58872 MTCO3P46-201ENST00000425787 232 ntBASIC2.71□□□□□ -1.98
RHBDL3P58872 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RHBDL3P58872 RNU6-329P-201ENST00000459618 107 ntBASIC2.71□□□□□ -1.98
RHBDL3P58872 RPL31P58-201ENST00000469001 379 ntBASIC2.71□□□□□ -1.98
RHBDL3P58872 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.71□□□□□ -1.98
RHBDL3P58872 AC018710.1-201ENST00000506509 158 ntBASIC2.71□□□□□ -1.98
RHBDL3P58872 RNU6-1198P-201ENST00000516904 67 ntBASIC2.71□□□□□ -1.98
RHBDL3P58872 MRPS36P4-201ENST00000534436 298 ntBASIC2.71□□□□□ -1.98
RHBDL3P58872 MIR4790-201ENST00000577799 79 ntBASIC2.71□□□□□ -1.98
RHBDL3P58872 RMST_6.1-201ENST00000611980 203 ntBASIC2.71□□□□□ -1.98
RHBDL3P58872 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.71□□□□□ -1.98
RHBDL3P58872 MIR6766-201ENST00000622641 72 ntBASIC2.71□□□□□ -1.98
RHBDL3P58872 AC130454.1-201ENST00000622948 401 ntBASIC2.71□□□□□ -1.98
RHBDL3P58872 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.71□□□□□ -1.98
RHBDL3P58872 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.71□□□□□ -1.98
RHBDL3P58872 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RHBDL3P58872 Y_RNA.248-201ENST00000364501 109 ntBASIC2.7□□□□□ -1.98
RHBDL3P58872 Y_RNA.301-201ENST00000364990 103 ntBASIC2.7□□□□□ -1.98
RHBDL3P58872 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
RHBDL3P58872 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RHBDL3P58872 MIR221-201ENST00000385135 110 ntBASIC2.7□□□□□ -1.98
RHBDL3P58872 MTND3P8-201ENST00000412909 339 ntBASIC2.7□□□□□ -1.98
RHBDL3P58872 AC123900.1-201ENST00000420390 96 ntBASIC2.7□□□□□ -1.98
RHBDL3P58872 MTND2P29-201ENST00000438595 412 ntBASIC2.7□□□□□ -1.98
RHBDL3P58872 AC087477.1-201ENST00000465747 340 ntBASIC2.7□□□□□ -1.98
RHBDL3P58872 RPS27P27-201ENST00000498779 255 ntBASIC2.7□□□□□ -1.98
RHBDL3P58872 AC046134.1-201ENST00000514454 666 ntBASIC2.7□□□□□ -1.98
RHBDL3P58872 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.7□□□□□ -1.98
RHBDL3P58872 AL158827.2-201ENST00000602494 330 ntBASIC2.7□□□□□ -1.98
RHBDL3P58872 CYP2C61P-201ENST00000604072 290 ntBASIC2.7□□□□□ -1.98
RHBDL3P58872 SNRPGP20-201ENST00000604477 205 ntBASIC2.7□□□□□ -1.98
RHBDL3P58872 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.7□□□□□ -1.98
RHBDL3P58872 AC009318.2-201ENST00000610917 651 ntBASIC2.7□□□□□ -1.98
RHBDL3P58872 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.7□□□□□ -1.98
RHBDL3P58872 AC005562.2-201ENST00000618264 111 ntBASIC2.7□□□□□ -1.98
RHBDL3P58872 AL691447.3-201ENST00000635020 330 ntBASIC2.7□□□□□ -1.98
RHBDL3P58872 MTND4P5-201ENST00000435821 1374 ntBASIC2.7□□□□□ -1.98
RHBDL3P58872 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RHBDL3P58872 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RHBDL3P58872 RNU1-58P-201ENST00000362413 163 ntBASIC2.69□□□□□ -1.98
RHBDL3P58872 RNU6-593P-201ENST00000364716 112 ntBASIC2.69□□□□□ -1.98
RHBDL3P58872 SNORD31B-201ENST00000364977 69 ntBASIC2.69□□□□□ -1.98
RHBDL3P58872 Y_RNA.332-201ENST00000365271 113 ntBASIC2.69□□□□□ -1.98
RHBDL3P58872 CR769767.1-201ENST00000436337 346 ntBASIC2.69□□□□□ -1.98
RHBDL3P58872 PPP1R2P5-201ENST00000457256 603 ntBASIC2.69□□□□□ -1.98
RHBDL3P58872 RNU7-14P-201ENST00000459331 62 ntBASIC2.69□□□□□ -1.98
RHBDL3P58872 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.69□□□□□ -1.98
RHBDL3P58872 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.69□□□□□ -1.98
RHBDL3P58872 MIR4273-201ENST00000582824 84 ntBASIC2.69□□□□□ -1.98
RHBDL3P58872 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.69□□□□□ -1.98
RHBDL3P58872 TCL6_2.1-201ENST00000615162 119 ntBASIC2.69□□□□□ -1.98
RHBDL3P58872 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.69□□□□□ -1.98
RHBDL3P58872 MTND5P9-201ENST00000503854 1755 ntBASIC2.69□□□□□ -1.98
RHBDL3P58872 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.68□□□□□ -1.98
RHBDL3P58872 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
RHBDL3P58872 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RHBDL3P58872 SNORD50.1-201ENST00000362987 71 ntBASIC2.68□□□□□ -1.98
RHBDL3P58872 RNU1-51P-201ENST00000365345 176 ntBASIC2.68□□□□□ -1.98
RHBDL3P58872 SNORA64-201ENST00000384674 134 ntBASIC2.68□□□□□ -1.98
RHBDL3P58872 MIR300-201ENST00000401138 83 ntBASIC2.68□□□□□ -1.98
RHBDL3P58872 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.68□□□□□ -1.98
RHBDL3P58872 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.68□□□□□ -1.98
RHBDL3P58872 RNA5SP233-201ENST00000459153 113 ntBASIC2.68□□□□□ -1.98
RHBDL3P58872 RPL23AP75-201ENST00000491601 451 ntBASIC2.68□□□□□ -1.98
RHBDL3P58872 AC069439.1-201ENST00000494739 167 ntBASIC2.68□□□□□ -1.98
RHBDL3P58872 RNU6-237P-201ENST00000515985 71 ntBASIC2.68□□□□□ -1.98
RHBDL3P58872 RNU6-1098P-201ENST00000516772 96 ntBASIC2.68□□□□□ -1.98
RHBDL3P58872 RNU6-1088P-201ENST00000516850 104 ntBASIC2.68□□□□□ -1.98
RHBDL3P58872 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RHBDL3P58872 MIR4742-201ENST00000581069 85 ntBASIC2.68□□□□□ -1.98
RHBDL3P58872 AC025754.2-201ENST00000606491 432 ntBASIC2.68□□□□□ -1.98
RHBDL3P58872 U1.36-201ENST00000620684 176 ntBASIC2.68□□□□□ -1.98
RHBDL3P58872 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RHBDL3P58872 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RHBDL3P58872 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms