Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNU6-708P-201ENST00000384217 107 ntBASIC2.48□□□□□ -2.01
CDH12P55289 RNU6-378P-201ENST00000384324 107 ntBASIC2.48□□□□□ -2.01
CDH12P55289 MIR218-1-201ENST00000384999 110 ntBASIC2.48□□□□□ -2.01
CDH12P55289 RNA5SP213-201ENST00000391031 106 ntBASIC2.48□□□□□ -2.01
CDH12P55289 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CDH12P55289 RNU6-985P-201ENST00000410182 104 ntBASIC2.48□□□□□ -2.01
CDH12P55289 RNA5SP201-201ENST00000410316 124 ntBASIC2.48□□□□□ -2.01
CDH12P55289 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.48□□□□□ -2.01
CDH12P55289 AC112220.1-201ENST00000434628 355 ntBASIC2.48□□□□□ -2.01
CDH12P55289 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.48□□□□□ -2.01
CDH12P55289 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH12P55289 Z96811.1-201ENST00000445880 108 ntBASIC2.48□□□□□ -2.01
CDH12P55289 RPS3P1-201ENST00000456781 192 ntBASIC2.48□□□□□ -2.01
CDH12P55289 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH12P55289 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.48□□□□□ -2.01
CDH12P55289 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.48□□□□□ -2.01
CDH12P55289 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH12P55289 RNU6-1045P-201ENST00000516321 107 ntBASIC2.48□□□□□ -2.01
CDH12P55289 SNORA40.14-201ENST00000516543 86 ntBASIC2.48□□□□□ -2.01
CDH12P55289 AC090617.3-201ENST00000573670 475 ntBASIC2.48□□□□□ -2.01
CDH12P55289 MIR3923-201ENST00000579521 83 ntBASIC2.48□□□□□ -2.01
CDH12P55289 MIR3670-2-201ENST00000582974 65 ntBASIC2.48□□□□□ -2.01
CDH12P55289 MIR4635-201ENST00000583759 79 ntBASIC2.48□□□□□ -2.01
CDH12P55289 MIR3670-1-201ENST00000584160 65 ntBASIC2.48□□□□□ -2.01
CDH12P55289 MIR3670-3-201ENST00000584855 65 ntBASIC2.48□□□□□ -2.01
CDH12P55289 RPL30P11-203ENST00000598995 310 ntBASIC2.48□□□□□ -2.01
CDH12P55289 AC008737.2-201ENST00000599446 118 ntBASIC2.48□□□□□ -2.01
CDH12P55289 MIR3670-4-201ENST00000612260 65 ntBASIC2.48□□□□□ -2.01
CDH12P55289 AC005520.5-201ENST00000613926 164 ntBASIC2.48□□□□□ -2.01
CDH12P55289 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.48□□□□□ -2.01
CDH12P55289 AC137590.2-201ENST00000619709 240 ntBASIC2.48□□□□□ -2.01
CDH12P55289 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CDH12P55289 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CDH12P55289 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDH12P55289 AC080128.1-201ENST00000474389 1917 ntBASIC2.47□□□□□ -2.01
CDH12P55289 VTRNA1-1-201ENST00000363120 99 ntBASIC2.47□□□□□ -2.01
CDH12P55289 Y_RNA.319-201ENST00000365138 92 ntBASIC2.47□□□□□ -2.01
CDH12P55289 SNORA44-201ENST00000384584 132 ntBASIC2.47□□□□□ -2.01
CDH12P55289 MIR549A-201ENST00000385268 96 ntBASIC2.47□□□□□ -2.01
CDH12P55289 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CDH12P55289 RNU6-823P-201ENST00000391042 103 ntBASIC2.47□□□□□ -2.01
CDH12P55289 MIR208B-201ENST00000401172 77 ntBASIC2.47□□□□□ -2.01
CDH12P55289 AL138827.1-201ENST00000402666 306 ntBASIC2.47□□□□□ -2.01
CDH12P55289 AC114482.1-201ENST00000418010 247 ntBASIC2.47□□□□□ -2.01
CDH12P55289 AL445305.1-201ENST00000432577 575 ntBASIC2.47□□□□□ -2.01
CDH12P55289 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH12P55289 RPS15AP7-201ENST00000439294 405 ntBASIC2.47□□□□□ -2.01
CDH12P55289 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.47□□□□□ -2.01
CDH12P55289 AC073901.1-201ENST00000462471 408 ntBASIC2.47□□□□□ -2.01
CDH12P55289 S100A11P2-201ENST00000467589 312 ntBASIC2.47□□□□□ -2.01
CDH12P55289 AC140059.1-201ENST00000489238 361 ntBASIC2.47□□□□□ -2.01
CDH12P55289 AC145146.1-201ENST00000496370 254 ntBASIC2.47□□□□□ -2.01
CDH12P55289 RNU6-1046P-201ENST00000516538 107 ntBASIC2.47□□□□□ -2.01
CDH12P55289 RNU6-58P-201ENST00000517143 103 ntBASIC2.47□□□□□ -2.01
CDH12P55289 UBL5P4-201ENST00000562584 236 ntBASIC2.47□□□□□ -2.01
CDH12P55289 MIR3199-1-201ENST00000582434 88 ntBASIC2.47□□□□□ -2.01
CDH12P55289 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH12P55289 AL356575.1-201ENST00000603008 283 ntBASIC2.47□□□□□ -2.01
CDH12P55289 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDH12P55289 AC010329.5-201ENST00000623497 2174 ntBASIC2.47□□□□□ -2.01
CDH12P55289 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CDH12P55289 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CDH12P55289 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CDH12P55289 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CDH12P55289 RNU6-1159P-201ENST00000362933 107 ntBASIC2.46□□□□□ -2.02
CDH12P55289 SNORD115-8-201ENST00000363856 82 ntBASIC2.46□□□□□ -2.02
CDH12P55289 SNORD56.5-201ENST00000364281 72 ntBASIC2.46□□□□□ -2.02
CDH12P55289 RNU1-112P-201ENST00000364401 164 ntBASIC2.46□□□□□ -2.02
CDH12P55289 RNU4-56P-201ENST00000364700 142 ntBASIC2.46□□□□□ -2.02
CDH12P55289 SNORD115-38-201ENST00000365037 82 ntBASIC2.46□□□□□ -2.02
CDH12P55289 DEFA7P-201ENST00000382676 285 ntBASIC2.46□□□□□ -2.02
CDH12P55289 RNU6-1093P-201ENST00000391194 107 ntBASIC2.46□□□□□ -2.02
CDH12P55289 RNU1-139P-201ENST00000391307 165 ntBASIC2.46□□□□□ -2.02
CDH12P55289 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH12P55289 AL590556.1-201ENST00000423231 483 ntBASIC2.46□□□□□ -2.02
CDH12P55289 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH12P55289 USP9YP16-201ENST00000430287 407 ntBASIC2.46□□□□□ -2.02
CDH12P55289 AL135938.1-201ENST00000443141 297 ntBASIC2.46□□□□□ -2.02
CDH12P55289 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH12P55289 USP9YP23-201ENST00000455085 407 ntBASIC2.46□□□□□ -2.02
CDH12P55289 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH12P55289 AC107032.1-201ENST00000485945 480 ntBASIC2.46□□□□□ -2.02
CDH12P55289 AC132942.1-201ENST00000486753 483 ntBASIC2.46□□□□□ -2.02
CDH12P55289 SRIP1-201ENST00000489235 288 ntBASIC2.46□□□□□ -2.02
CDH12P55289 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH12P55289 RNU6-764P-201ENST00000516396 105 ntBASIC2.46□□□□□ -2.02
CDH12P55289 RNU6-911P-201ENST00000516523 104 ntBASIC2.46□□□□□ -2.02
CDH12P55289 SCARNA3-201ENST00000517097 143 ntBASIC2.46□□□□□ -2.02
CDH12P55289 Y_RNA.720-201ENST00000517166 92 ntBASIC2.46□□□□□ -2.02
CDH12P55289 AC113195.1-201ENST00000579952 141 ntBASIC2.46□□□□□ -2.02
CDH12P55289 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH12P55289 AC136443.5-201ENST00000603741 370 ntBASIC2.46□□□□□ -2.02
CDH12P55289 PCGEM1.1-201ENST00000613431 131 ntBASIC2.46□□□□□ -2.02
CDH12P55289 AL138825.1-201ENST00000618587 192 ntBASIC2.46□□□□□ -2.02
CDH12P55289 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
CDH12P55289 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH12P55289 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.46□□□□□ -2.02
CDH12P55289 AC138915.1-201ENST00000565427 1685 ntBASIC2.45□□□□□ -2.02
CDH12P55289 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.45□□□□□ -2.02
CDH12P55289 Y_RNA.389-201ENST00000383924 113 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms