Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
ACLYP53396 AC009161.2-201ENST00000624626 138 ntBASIC1.35□□□□□ -2.19
ACLYP53396 AC068205.3-201ENST00000636385 468 ntBASIC1.35□□□□□ -2.19
ACLYP53396 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
ACLYP53396 MIR222-201ENST00000384992 110 ntBASIC1.34□□□□□ -2.19
ACLYP53396 SNORA12.2-201ENST00000391040 156 ntBASIC1.34□□□□□ -2.19
ACLYP53396 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.34□□□□□ -2.19
ACLYP53396 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.34□□□□□ -2.19
ACLYP53396 AC002486.1-201ENST00000435098 391 ntBASIC1.34□□□□□ -2.19
ACLYP53396 RNA5SP269-201ENST00000459032 137 ntBASIC1.34□□□□□ -2.19
ACLYP53396 RNU7-14P-201ENST00000459331 62 ntBASIC1.34□□□□□ -2.19
ACLYP53396 AC007547.1-201ENST00000462177 490 ntBASIC1.34□□□□□ -2.19
ACLYP53396 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.34□□□□□ -2.19
ACLYP53396 AC091874.1-201ENST00000511402 339 ntBASIC1.34□□□□□ -2.19
ACLYP53396 RNU5F-4P-201ENST00000516581 114 ntBASIC1.34□□□□□ -2.19
ACLYP53396 RNU6-1098P-201ENST00000516772 96 ntBASIC1.34□□□□□ -2.19
ACLYP53396 AC069113.1-201ENST00000517763 267 ntBASIC1.34□□□□□ -2.19
ACLYP53396 AP005597.4-201ENST00000526762 229 ntBASIC1.34□□□□□ -2.19
ACLYP53396 EIF4A1P12-201ENST00000551910 141 ntBASIC1.34□□□□□ -2.19
ACLYP53396 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.34□□□□□ -2.19
ACLYP53396 CYP4A27P-201ENST00000567218 190 ntBASIC1.34□□□□□ -2.19
ACLYP53396 MIR6788-201ENST00000618842 66 ntBASIC1.34□□□□□ -2.19
ACLYP53396 AL450472.1-202ENST00000637286 180 ntBASIC1.34□□□□□ -2.19
ACLYP53396 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
ACLYP53396 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.34□□□□□ -2.2
ACLYP53396 RNU6-181P-201ENST00000363225 107 ntBASIC1.33□□□□□ -2.2
ACLYP53396 Y_RNA.201-201ENST00000364052 96 ntBASIC1.33□□□□□ -2.2
ACLYP53396 SNORD31B-201ENST00000364977 69 ntBASIC1.33□□□□□ -2.2
ACLYP53396 RNU6-378P-201ENST00000384324 107 ntBASIC1.33□□□□□ -2.2
ACLYP53396 Y_RNA.504-201ENST00000384481 104 ntBASIC1.33□□□□□ -2.2
ACLYP53396 RNU1-78P-201ENST00000391248 165 ntBASIC1.33□□□□□ -2.2
ACLYP53396 SNORA26.8-201ENST00000391306 124 ntBASIC1.33□□□□□ -2.2
ACLYP53396 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
ACLYP53396 MIR548J-201ENST00000408833 112 ntBASIC1.33□□□□□ -2.2
ACLYP53396 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.33□□□□□ -2.2
ACLYP53396 MTND2P18-201ENST00000419962 1030 ntBASIC1.33□□□□□ -2.2
ACLYP53396 PIGFP2-201ENST00000421400 651 ntBASIC1.33□□□□□ -2.2
ACLYP53396 MTCO2P34-201ENST00000421994 607 ntBASIC1.33□□□□□ -2.2
ACLYP53396 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.33□□□□□ -2.2
ACLYP53396 VN1R108P-201ENST00000431580 830 ntBASIC1.33□□□□□ -2.2
ACLYP53396 HSPE1P24-201ENST00000450782 238 ntBASIC1.33□□□□□ -2.2
ACLYP53396 AC016925.1-201ENST00000458303 298 ntBASIC1.33□□□□□ -2.2
ACLYP53396 RNU6-445P-201ENST00000516949 107 ntBASIC1.33□□□□□ -2.2
ACLYP53396 AC021231.3-201ENST00000558497 370 ntBASIC1.33□□□□□ -2.2
ACLYP53396 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.33□□□□□ -2.2
ACLYP53396 MIR3941-201ENST00000582572 103 ntBASIC1.33□□□□□ -2.2
ACLYP53396 MIR151B-201ENST00000584249 96 ntBASIC1.33□□□□□ -2.2
ACLYP53396 AP001836.1-201ENST00000604675 523 ntBASIC1.33□□□□□ -2.2
ACLYP53396 AC069114.2-201ENST00000604699 304 ntBASIC1.33□□□□□ -2.2
ACLYP53396 AP001485.1-201ENST00000604799 199 ntBASIC1.33□□□□□ -2.2
ACLYP53396 AP001596.2-201ENST00000608410 312 ntBASIC1.33□□□□□ -2.2
ACLYP53396 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.33□□□□□ -2.2
ACLYP53396 AC136475.10-201ENST00000620253 385 ntBASIC1.33□□□□□ -2.2
ACLYP53396 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
ACLYP53396 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
ACLYP53396 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
ACLYP53396 RNU1-76P-201ENST00000362903 159 ntBASIC1.32□□□□□ -2.2
ACLYP53396 Y_RNA.399-201ENST00000383955 105 ntBASIC1.32□□□□□ -2.2
ACLYP53396 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
ACLYP53396 RNU2-29P-201ENST00000410423 189 ntBASIC1.32□□□□□ -2.2
ACLYP53396 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.32□□□□□ -2.2
ACLYP53396 SNRPEP10-201ENST00000420249 274 ntBASIC1.32□□□□□ -2.2
ACLYP53396 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.32□□□□□ -2.2
ACLYP53396 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.32□□□□□ -2.2
ACLYP53396 AC087343.1-201ENST00000477341 475 ntBASIC1.32□□□□□ -2.2
ACLYP53396 RPL26P26-201ENST00000480251 434 ntBASIC1.32□□□□□ -2.2
ACLYP53396 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.32□□□□□ -2.2
ACLYP53396 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.32□□□□□ -2.2
ACLYP53396 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.32□□□□□ -2.2
ACLYP53396 HMGB1P33-201ENST00000563485 527 ntBASIC1.32□□□□□ -2.2
ACLYP53396 SNORA77B-201ENST00000578179 125 ntBASIC1.32□□□□□ -2.2
ACLYP53396 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.32□□□□□ -2.2
ACLYP53396 MIR4295-201ENST00000585286 85 ntBASIC1.32□□□□□ -2.2
ACLYP53396 RPL17P51-201ENST00000605218 238 ntBASIC1.32□□□□□ -2.2
ACLYP53396 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
ACLYP53396 PVT1_3.1-201ENST00000620853 95 ntBASIC1.32□□□□□ -2.2
ACLYP53396 AL159152.1-201ENST00000635019 2587 ntBASIC1.31□□□□□ -2.2
ACLYP53396 SNORD114-26-201ENST00000363543 72 ntBASIC1.31□□□□□ -2.2
ACLYP53396 RNU6-271P-201ENST00000363858 105 ntBASIC1.31□□□□□ -2.2
ACLYP53396 MIR520A-201ENST00000384862 85 ntBASIC1.31□□□□□ -2.2
ACLYP53396 RNU2-9P-201ENST00000410194 145 ntBASIC1.31□□□□□ -2.2
ACLYP53396 EBAG9P1-201ENST00000418955 543 ntBASIC1.31□□□□□ -2.2
ACLYP53396 HSPE1P9-201ENST00000440046 311 ntBASIC1.31□□□□□ -2.2
ACLYP53396 JTBP1-201ENST00000441314 247 ntBASIC1.31□□□□□ -2.2
ACLYP53396 ATP5J2P3-201ENST00000451550 258 ntBASIC1.31□□□□□ -2.2
ACLYP53396 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.31□□□□□ -2.2
ACLYP53396 RPL9P9-202ENST00000466501 579 ntBASIC1.31□□□□□ -2.2
ACLYP53396 AC008628.2-201ENST00000502605 298 ntBASIC1.31□□□□□ -2.2
ACLYP53396 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.31□□□□□ -2.2
ACLYP53396 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.31□□□□□ -2.2
ACLYP53396 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.31□□□□□ -2.2
ACLYP53396 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.31□□□□□ -2.2
ACLYP53396 AC068338.1-201ENST00000565567 176 ntBASIC1.31□□□□□ -2.2
ACLYP53396 AC012414.6-201ENST00000568241 401 ntBASIC1.31□□□□□ -2.2
ACLYP53396 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.31□□□□□ -2.2
ACLYP53396 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.31□□□□□ -2.2
ACLYP53396 AL603755.1-201ENST00000619504 163 ntBASIC1.31□□□□□ -2.2
ACLYP53396 AL136221.1-201ENST00000621449 509 ntBASIC1.31□□□□□ -2.2
ACLYP53396 SNORA43.4-201ENST00000629559 138 ntBASIC1.31□□□□□ -2.2
ACLYP53396 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms