Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC008752.3-201ENST00000588113 712 ntBASIC0.37□□□□□ -2.35
NUP98P52948 AL596327.1-201ENST00000603629 213 ntBASIC0.37□□□□□ -2.35
NUP98P52948 AL356157.2-201ENST00000605122 111 ntBASIC0.37□□□□□ -2.35
NUP98P52948 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.37□□□□□ -2.35
NUP98P52948 RNU6-1192P-201ENST00000612197 107 ntBASIC0.37□□□□□ -2.35
NUP98P52948 AC040896.1-201ENST00000613819 479 ntBASIC0.37□□□□□ -2.35
NUP98P52948 RNU6-489P-201ENST00000618289 107 ntBASIC0.37□□□□□ -2.35
NUP98P52948 uc_338.17-201ENST00000619633 179 ntBASIC0.37□□□□□ -2.35
NUP98P52948 U4.7-201ENST00000638126 106 ntBASIC0.37□□□□□ -2.35
NUP98P52948 RNA5SP361-201ENST00000362686 118 ntBASIC0.36□□□□□ -2.35
NUP98P52948 RNU6-105P-201ENST00000363909 104 ntBASIC0.36□□□□□ -2.35
NUP98P52948 RNU4-12P-201ENST00000365233 139 ntBASIC0.36□□□□□ -2.35
NUP98P52948 RNU6-378P-201ENST00000384324 107 ntBASIC0.36□□□□□ -2.35
NUP98P52948 RNU6-1237P-201ENST00000384777 107 ntBASIC0.36□□□□□ -2.35
NUP98P52948 RNA5SP299-201ENST00000391203 116 ntBASIC0.36□□□□□ -2.35
NUP98P52948 AC092809.3-201ENST00000415453 231 ntBASIC0.36□□□□□ -2.35
NUP98P52948 AC114491.1-201ENST00000416095 246 ntBASIC0.36□□□□□ -2.35
NUP98P52948 RNU7-51P-201ENST00000516560 62 ntBASIC0.36□□□□□ -2.35
NUP98P52948 AC010376.1-201ENST00000522101 334 ntBASIC0.36□□□□□ -2.35
NUP98P52948 AC007834.2-201ENST00000536310 343 ntBASIC0.36□□□□□ -2.35
NUP98P52948 ZNF321P-202ENST00000550843 495 ntBASIC0.36□□□□□ -2.35
NUP98P52948 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.36□□□□□ -2.35
NUP98P52948 MIR5697-201ENST00000578045 78 ntBASIC0.36□□□□□ -2.35
NUP98P52948 AC024060.1-201ENST00000607052 494 ntBASIC0.36□□□□□ -2.35
NUP98P52948 AC144521.1-201ENST00000607148 956 ntBASIC0.36□□□□□ -2.35
NUP98P52948 AC021506.2-201ENST00000612354 169 ntBASIC0.36□□□□□ -2.35
NUP98P52948 PCGEM1.1-201ENST00000613431 131 ntBASIC0.36□□□□□ -2.35
NUP98P52948 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
NUP98P52948 Y_RNA.472-201ENST00000384322 102 ntBASIC0.36□□□□□ -2.35
NUP98P52948 RNU6-950P-201ENST00000384651 107 ntBASIC0.36□□□□□ -2.35
NUP98P52948 MIR605-201ENST00000385078 83 ntBASIC0.36□□□□□ -2.35
NUP98P52948 AL031577.2-201ENST00000404133 280 ntBASIC0.36□□□□□ -2.35
NUP98P52948 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.36□□□□□ -2.35
NUP98P52948 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.36□□□□□ -2.35
NUP98P52948 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.36□□□□□ -2.35
NUP98P52948 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.36□□□□□ -2.35
NUP98P52948 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.36□□□□□ -2.35
NUP98P52948 RNU6-1041P-201ENST00000516254 102 ntBASIC0.36□□□□□ -2.35
NUP98P52948 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.36□□□□□ -2.35
NUP98P52948 AC016256.1-201ENST00000547971 354 ntBASIC0.36□□□□□ -2.35
NUP98P52948 AC104073.3-201ENST00000610942 955 ntBASIC0.36□□□□□ -2.35
NUP98P52948 AC136475.10-201ENST00000620253 385 ntBASIC0.36□□□□□ -2.35
NUP98P52948 MIR338-201ENST00000636369 67 ntBASIC0.36□□□□□ -2.35
NUP98P52948 AC068647.2-201ENST00000637380 353 ntBASIC0.36□□□□□ -2.35
NUP98P52948 MIR6759-201ENST00000638110 65 ntBASIC0.36□□□□□ -2.35
NUP98P52948 Y_RNA.471-201ENST00000384312 102 ntBASIC0.35□□□□□ -2.35
NUP98P52948 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.35□□□□□ -2.35
NUP98P52948 RPS26P48-201ENST00000491713 339 ntBASIC0.35□□□□□ -2.35
NUP98P52948 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.35□□□□□ -2.35
NUP98P52948 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.35□□□□□ -2.35
NUP98P52948 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.35□□□□□ -2.35
NUP98P52948 AL606834.3-201ENST00000602615 496 ntBASIC0.35□□□□□ -2.35
NUP98P52948 AC104465.1-201ENST00000611365 139 ntBASIC0.35□□□□□ -2.35
NUP98P52948 AL512506.1-201ENST00000613918 449 ntBASIC0.35□□□□□ -2.35
NUP98P52948 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.35□□□□□ -2.35
NUP98P52948 RNU4-67P-201ENST00000364569 141 ntBASIC0.34□□□□□ -2.35
NUP98P52948 SNORD99-201ENST00000408612 74 ntBASIC0.34□□□□□ -2.35
NUP98P52948 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.34□□□□□ -2.35
NUP98P52948 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.34□□□□□ -2.35
NUP98P52948 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.34□□□□□ -2.35
NUP98P52948 HMGN1P12-201ENST00000499125 195 ntBASIC0.34□□□□□ -2.35
NUP98P52948 AC113410.1-201ENST00000505029 247 ntBASIC0.34□□□□□ -2.35
NUP98P52948 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.34□□□□□ -2.35
NUP98P52948 RNU6-1003P-201ENST00000517099 105 ntBASIC0.34□□□□□ -2.35
NUP98P52948 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.34□□□□□ -2.35
NUP98P52948 AC025423.5-201ENST00000550230 219 ntBASIC0.34□□□□□ -2.35
NUP98P52948 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.34□□□□□ -2.35
NUP98P52948 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.34□□□□□ -2.35
NUP98P52948 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.34□□□□□ -2.35
NUP98P52948 MIR6718-201ENST00000616153 80 ntBASIC0.34□□□□□ -2.35
NUP98P52948 SNORD3E-202ENST00000627253 216 ntBASIC0.34□□□□□ -2.35
NUP98P52948 AC092268.1-201ENST00000342691 405 ntBASIC0.34□□□□□ -2.36
NUP98P52948 RNU6-621P-201ENST00000364752 109 ntBASIC0.34□□□□□ -2.36
NUP98P52948 SNORA80D-201ENST00000384488 135 ntBASIC0.34□□□□□ -2.36
NUP98P52948 SNORD12-201ENST00000391002 90 ntBASIC0.34□□□□□ -2.36
NUP98P52948 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.34□□□□□ -2.36
NUP98P52948 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.34□□□□□ -2.36
NUP98P52948 AC019070.1-201ENST00000415008 1024 ntBASIC0.34□□□□□ -2.36
NUP98P52948 RPS26P5-201ENST00000418544 335 ntBASIC0.34□□□□□ -2.36
NUP98P52948 AC011233.1-201ENST00000422812 283 ntBASIC0.34□□□□□ -2.36
NUP98P52948 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.34□□□□□ -2.36
NUP98P52948 RNU7-90P-201ENST00000459216 62 ntBASIC0.34□□□□□ -2.36
NUP98P52948 RNU6-377P-201ENST00000515965 102 ntBASIC0.34□□□□□ -2.36
NUP98P52948 RNU6-947P-201ENST00000516264 106 ntBASIC0.34□□□□□ -2.36
NUP98P52948 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.34□□□□□ -2.36
NUP98P52948 AC123904.2-201ENST00000548059 300 ntBASIC0.34□□□□□ -2.36
NUP98P52948 EIF4A1P12-201ENST00000551910 141 ntBASIC0.34□□□□□ -2.36
NUP98P52948 MIR548AC-201ENST00000585049 88 ntBASIC0.34□□□□□ -2.36
NUP98P52948 AL139286.2-201ENST00000606838 396 ntBASIC0.34□□□□□ -2.36
NUP98P52948 AC126177.8-201ENST00000618339 1015 ntBASIC0.34□□□□□ -2.36
NUP98P52948 AC126544.2-201ENST00000625174 749 ntBASIC0.34□□□□□ -2.36
NUP98P52948 AL445523.1-201ENST00000451184 1362 ntBASIC0.33□□□□□ -2.36
NUP98P52948 U3.4-201ENST00000363352 213 ntBASIC0.33□□□□□ -2.36
NUP98P52948 AC002429.1-201ENST00000437672 148 ntBASIC0.33□□□□□ -2.36
NUP98P52948 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.33□□□□□ -2.36
NUP98P52948 RNU1-86P-201ENST00000516108 154 ntBASIC0.33□□□□□ -2.36
NUP98P52948 RNU1-107P-201ENST00000516617 154 ntBASIC0.33□□□□□ -2.36
NUP98P52948 RNU4-79P-201ENST00000362764 141 ntBASIC0.32□□□□□ -2.36
NUP98P52948 RNU6-534P-201ENST00000364877 106 ntBASIC0.32□□□□□ -2.36
NUP98P52948 RNU6-298P-201ENST00000390888 96 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms