Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RNU6-470P-201ENST00000515954 104 ntBASIC2.43□□□□□ -2.02
CLCNKAP51800 RNU5F-2P-201ENST00000516066 82 ntBASIC2.43□□□□□ -2.02
CLCNKAP51800 RNU2-53P-201ENST00000516257 147 ntBASIC2.43□□□□□ -2.02
CLCNKAP51800 SCARNA3-201ENST00000517097 143 ntBASIC2.43□□□□□ -2.02
CLCNKAP51800 AP002770.2-201ENST00000543613 532 ntBASIC2.43□□□□□ -2.02
CLCNKAP51800 AL078605.1-201ENST00000603529 500 ntBASIC2.43□□□□□ -2.02
CLCNKAP51800 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.43□□□□□ -2.02
CLCNKAP51800 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
CLCNKAP51800 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLCNKAP51800 RNU6-1115P-201ENST00000362490 106 ntBASIC2.42□□□□□ -2.02
CLCNKAP51800 RNU6-655P-201ENST00000362858 107 ntBASIC2.42□□□□□ -2.02
CLCNKAP51800 RNU6-486P-201ENST00000363116 107 ntBASIC2.42□□□□□ -2.02
CLCNKAP51800 Y_RNA.132-201ENST00000363421 102 ntBASIC2.42□□□□□ -2.02
CLCNKAP51800 RNU6-595P-201ENST00000363944 107 ntBASIC2.42□□□□□ -2.02
CLCNKAP51800 EIF4EP4-201ENST00000424916 578 ntBASIC2.42□□□□□ -2.02
CLCNKAP51800 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.42□□□□□ -2.02
CLCNKAP51800 AC078809.1-201ENST00000427601 140 ntBASIC2.42□□□□□ -2.02
CLCNKAP51800 MTCO3P29-201ENST00000432119 779 ntBASIC2.42□□□□□ -2.02
CLCNKAP51800 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.42□□□□□ -2.02
CLCNKAP51800 snoU13.6-201ENST00000458785 104 ntBASIC2.42□□□□□ -2.02
CLCNKAP51800 Y_RNA.639-201ENST00000458981 102 ntBASIC2.42□□□□□ -2.02
CLCNKAP51800 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.42□□□□□ -2.02
CLCNKAP51800 AC068781.1-201ENST00000488231 618 ntBASIC2.42□□□□□ -2.02
CLCNKAP51800 AC021146.2-201ENST00000504736 556 ntBASIC2.42□□□□□ -2.02
CLCNKAP51800 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.42□□□□□ -2.02
CLCNKAP51800 AC109329.1-201ENST00000518744 317 ntBASIC2.42□□□□□ -2.02
CLCNKAP51800 AC115990.1-201ENST00000526957 301 ntBASIC2.42□□□□□ -2.02
CLCNKAP51800 MIR5571-201ENST00000577998 113 ntBASIC2.42□□□□□ -2.02
CLCNKAP51800 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.42□□□□□ -2.02
CLCNKAP51800 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CLCNKAP51800 AP000560.1-201ENST00000624150 1937 ntBASIC2.42□□□□□ -2.02
CLCNKAP51800 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CLCNKAP51800 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CLCNKAP51800 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CLCNKAP51800 OR56A5-201ENST00000340110 738 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 AC092268.1-201ENST00000342691 405 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 RNU1-72P-201ENST00000362976 153 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 RNU6-142P-201ENST00000384019 107 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 RNU6-474P-201ENST00000384243 107 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 Y_RNA.463-201ENST00000384271 102 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CLCNKAP51800 RNU6-308P-201ENST00000390957 107 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 SNORA26.3-201ENST00000391119 136 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.41□□□□□ -2.02
CLCNKAP51800 AC080013.2-201ENST00000460866 323 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 RPL17P19-201ENST00000489069 552 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 AC140059.1-201ENST00000489238 361 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 RPL23AP75-201ENST00000491601 451 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.41□□□□□ -2.02
CLCNKAP51800 RNU6-699P-201ENST00000517081 110 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.41□□□□□ -2.02
CLCNKAP51800 AC010928.2-201ENST00000588017 287 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
CLCNKAP51800 Z98751.3-201ENST00000604447 521 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 AL034555.1-201ENST00000604816 211 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 AL137847.3-201ENST00000611521 109 ntBASIC2.41□□□□□ -2.02
CLCNKAP51800 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CLCNKAP51800 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CLCNKAP51800 snoU2_19.1-201ENST00000362361 80 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 RNU5B-2P-201ENST00000363036 113 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 RNU6-1210P-201ENST00000363775 107 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 Y_RNA.197-201ENST00000364004 102 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 RNU6-99P-201ENST00000364721 107 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 RNU6-220P-201ENST00000390919 107 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 RNA5SP181-201ENST00000410246 98 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 RNA5SP494-201ENST00000410653 129 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 MRPS18CP6-201ENST00000423587 223 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.4□□□□□ -2.03
CLCNKAP51800 AL353752.1-201ENST00000454946 260 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 AC087477.1-201ENST00000465747 340 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 RPL30P10-201ENST00000488148 337 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 HMGB1P35-201ENST00000503360 598 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 AC105758.1-201ENST00000506038 399 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 RNU6-264P-201ENST00000517134 104 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 RNA5SP402-201ENST00000517148 110 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 AL590705.4-201ENST00000532209 134 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.4□□□□□ -2.03
CLCNKAP51800 AC021231.3-201ENST00000558497 370 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 AC007336.1-201ENST00000576365 3828 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 MIR5701-3-201ENST00000578890 82 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 MIR5701-1-201ENST00000585138 82 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 RPL30P11-203ENST00000598995 310 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 AC069294.1-201ENST00000608397 350 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 MIR1244-1-201ENST00000612829 85 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 MIR5701-2-201ENST00000615634 82 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 SCARNA4-201ENST00000629045 128 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 MIR1244-3-201ENST00000635744 85 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 MIR1244-2-201ENST00000636449 85 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 MIR1244-4-202ENST00000636813 85 ntBASIC2.4□□□□□ -2.03
CLCNKAP51800 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.4□□□□□ -2.03
CLCNKAP51800 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CLCNKAP51800 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CLCNKAP51800 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.39□□□□□ -2.03
CLCNKAP51800 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.39□□□□□ -2.03
CLCNKAP51800 Y_RNA.5-201ENST00000362334 102 ntBASIC2.39□□□□□ -2.03
CLCNKAP51800 Y_RNA.31-201ENST00000362574 102 ntBASIC2.39□□□□□ -2.03
CLCNKAP51800 Y_RNA.445-201ENST00000384168 102 ntBASIC2.39□□□□□ -2.03
CLCNKAP51800 MIR487A-201ENST00000385009 80 ntBASIC2.39□□□□□ -2.03
CLCNKAP51800 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.39□□□□□ -2.03
CLCNKAP51800 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms