Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 U3.13-201ENST00000364804 214 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 RNA5SP125-201ENST00000364843 120 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 RNU6-1072P-201ENST00000384703 107 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 RNU6-443P-201ENST00000384780 107 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 SNORA26.3-201ENST00000391119 136 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 SNORA26.9-201ENST00000391322 122 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 AL627390.1-201ENST00000396055 340 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NEDD4P46934 RPL21P111-201ENST00000418453 477 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 AL139396.1-201ENST00000421137 167 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.07□□□□□ -2.08
NEDD4P46934 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.07□□□□□ -2.08
NEDD4P46934 RNU7-26P-201ENST00000458980 63 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 AC130509.1-201ENST00000464158 433 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 SNRPGP7-201ENST00000469016 106 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 AC104564.1-201ENST00000493028 407 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.07□□□□□ -2.08
NEDD4P46934 RNU6-567P-201ENST00000516746 107 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.07□□□□□ -2.08
NEDD4P46934 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.07□□□□□ -2.08
NEDD4P46934 MIR4742-201ENST00000581069 85 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 MIR4801-201ENST00000582704 82 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.07□□□□□ -2.08
NEDD4P46934 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.07□□□□□ -2.08
NEDD4P46934 AC078795.3-201ENST00000602913 472 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 AL133215.3-201ENST00000609801 448 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NEDD4P46934 ZNF72P-201ENST00000425869 1908 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.06□□□□□ -2.08
NEDD4P46934 AC009541.1-201ENST00000438279 2662 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.06□□□□□ -2.08
NEDD4P46934 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.06□□□□□ -2.08
NEDD4P46934 RNU6-1283P-201ENST00000365314 105 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 MIR561-201ENST00000385216 97 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 AC138393.2-201ENST00000414742 246 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.06□□□□□ -2.08
NEDD4P46934 AL590135.1-201ENST00000422215 156 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 AL590556.1-201ENST00000423231 483 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 AC019205.3-201ENST00000424573 156 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.06□□□□□ -2.08
NEDD4P46934 DAP3P1-201ENST00000441522 278 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 AC016700.2-201ENST00000446011 156 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.06□□□□□ -2.08
NEDD4P46934 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.06□□□□□ -2.08
NEDD4P46934 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.06□□□□□ -2.08
NEDD4P46934 AC015911.1-201ENST00000495111 156 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 RPL39P5-202ENST00000512505 151 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.06□□□□□ -2.08
NEDD4P46934 RNU6-1088P-201ENST00000516850 104 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 RNU6-250P-201ENST00000516958 103 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 SNORA48.11-201ENST00000517015 89 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 AC021231.3-201ENST00000558497 370 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.06□□□□□ -2.08
NEDD4P46934 MIR4658-201ENST00000584344 65 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 AC019193.3-201ENST00000609144 554 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 SNORD98-201ENST00000636377 67 ntBASIC2.06□□□□□ -2.08
NEDD4P46934 RNU6-845P-201ENST00000362578 103 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 Y_RNA.166-201ENST00000363730 102 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 RNU6-790P-201ENST00000384479 105 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.05□□□□□ -2.08
NEDD4P46934 AL590632.1-201ENST00000424289 371 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.05□□□□□ -2.08
NEDD4P46934 MTND3P9-201ENST00000429526 346 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 IPO7P1-201ENST00000442031 636 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 AL353572.1-201ENST00000442490 417 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 MTND1P17-201ENST00000448961 204 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 AL353752.1-201ENST00000454946 260 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 PPP1R2P5-201ENST00000457256 603 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 RNU7-187P-201ENST00000458985 68 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 AC116353.2-201ENST00000505332 712 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.05□□□□□ -2.08
NEDD4P46934 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.05□□□□□ -2.08
NEDD4P46934 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.05□□□□□ -2.08
NEDD4P46934 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.05□□□□□ -2.08
NEDD4P46934 AP005639.2-201ENST00000527592 928 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.05□□□□□ -2.08
NEDD4P46934 AC118273.2-201ENST00000532092 465 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.05□□□□□ -2.08
NEDD4P46934 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.05□□□□□ -2.08
NEDD4P46934 AL034555.1-201ENST00000604816 211 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 HMGB1P24-202ENST00000615653 685 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 AC022306.2-201ENST00000617563 647 ntBASIC2.05□□□□□ -2.08
NEDD4P46934 AL596028.1-201ENST00000326971 197 ntBASIC2.04□□□□□ -2.08
NEDD4P46934 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
NEDD4P46934 Y_RNA.151-201ENST00000363566 112 ntBASIC2.04□□□□□ -2.08
NEDD4P46934 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.04□□□□□ -2.08
NEDD4P46934 SNORA6-201ENST00000384033 151 ntBASIC2.04□□□□□ -2.08
NEDD4P46934 Y_RNA.504-201ENST00000384481 104 ntBASIC2.04□□□□□ -2.08
NEDD4P46934 MIR521-1-201ENST00000384902 87 ntBASIC2.04□□□□□ -2.08
NEDD4P46934 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.04□□□□□ -2.08
NEDD4P46934 GPM6BP3-201ENST00000442797 145 ntBASIC2.04□□□□□ -2.08
NEDD4P46934 MTND3P10-201ENST00000450967 341 ntBASIC2.04□□□□□ -2.08
NEDD4P46934 HMGN2P23-201ENST00000456759 269 ntBASIC2.04□□□□□ -2.08
NEDD4P46934 PMCHL2-203ENST00000457791 237 ntBASIC2.04□□□□□ -2.08
NEDD4P46934 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.04□□□□□ -2.08
NEDD4P46934 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.04□□□□□ -2.08
NEDD4P46934 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.04□□□□□ -2.08
NEDD4P46934 SNORA20.3-201ENST00000516880 132 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms